Gene Cpin_1387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1387 
Symbol 
ID8357506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1650072 
End bp1651439 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content39% 
IMG OID644963545 
Producthypothetical protein 
Protein accessionYP_003121085 
Protein GI256420432 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTATTGT TTGATGAACA GATACGAAGA ATAAAAGATA AACTTTCCCA GGCCCGGAAT 
GTTGATAAAT ACTTAACGGT ATTAGGCGCA AAAAATCATA AATACCAGGT GAATGAGCCT
GTTGCTGCGG AGGATATCCT TAAACTGGAA GAACAATACG GGGTTAGCTT CCCTGATTGT
TACAGGTCTT TCTTATTACA GGTTGGGAAT GGTGGTACCG GGTATGAAGA TTCGGCAGCC
GGCCCTTATT ATGGTATTTA TCCATTGGGG AGAAATATAA AAGAGCTCAT TGGTGATAAA
GCAGAAGAAT ATCTGAAGAA TGATTGTGTC ATTTATCCGG ACATGTCAGC GGAATATTGG
CAATCATTAA ATGCAAAGAT TGATGACGAT GAAGAGCTTT CGGATGAGGA GCTTTATAGA
GAACTGGGTA AAATATGGGG AGGTGTTATT CCTATCGGAT CCCAGGGTTG TGCGTATATT
CATGGGCTTA TTATAAATGG TGCATATAAG GGACGTGTTG TGAATATCTC TATGGATGGC
CCAAAACCAC AATTCACTTT TGAAGTCAAT TTCCTGGATT GGTATGAACG CTGGCTGGAT
GAAGTCATTT CTGGTCAACT ATTACAGGAT GGTGTAAATT GGTTTGGTTA TGCAATGGGA
GGCCCAGACA CGACAATGAT CCACCTGTTC TTAGAAACGG GTAGTATCAA GGAAAAAGAA
GAATGTTTAA AGGGCATTTT ATGTAAACAC AAATTAGAAG CGGAGACAAT AGAAATTGTT
GAAGAACAAT TGTTAAACGG CAGCAAGGAG TTTAAACAAG ATCTGCTTCA CATACTTACC
AAATTTGATT ATGGAAGAGC AAAACCTTAT CTGGTTGACC TGGCCCGAAC GGATATAGGA
AGTGTTTGCA GTATGATTCG TTGGTATGCA AAAAGCACCA GTGTTGAATG GGTACCGCTT
ATTCGCAAAT ACATAGCCGA TGTTGATGAT GCGGAGAAAT TCAGGTTTTG CACATATTTA
CTGGCTGATG CAACAGCTGA CTTTGGTGAC CTGATTGTTC CATTTGCAGA AAGAGAACAT
GAAGAAATGC AAGTGACAGC ATTTTATACA TTGGGGAAAT TGAAAAATAA AAGCGACTTT
TTAGAGACCT TTATAAAAGG ACTAAATGCC TCTTCTAACA GGGTTATTCA TAGCGCATTG
CAGGCACTTT CTGATGTGTA CGATATAAGG CTATTACAAC ATTATAAAAG AATCGCAGAA
AAATTCCCTG AAGAAAAGGA CTATATCTTA TCAAATCTGA ATCATAGGTT AGCAGCGTAT
GGCTTGAACA ATAAGACCAT TCTGCTGAAA AACGACTTGG GTGAATAA
 
Protein sequence
MVLFDEQIRR IKDKLSQARN VDKYLTVLGA KNHKYQVNEP VAAEDILKLE EQYGVSFPDC 
YRSFLLQVGN GGTGYEDSAA GPYYGIYPLG RNIKELIGDK AEEYLKNDCV IYPDMSAEYW
QSLNAKIDDD EELSDEELYR ELGKIWGGVI PIGSQGCAYI HGLIINGAYK GRVVNISMDG
PKPQFTFEVN FLDWYERWLD EVISGQLLQD GVNWFGYAMG GPDTTMIHLF LETGSIKEKE
ECLKGILCKH KLEAETIEIV EEQLLNGSKE FKQDLLHILT KFDYGRAKPY LVDLARTDIG
SVCSMIRWYA KSTSVEWVPL IRKYIADVDD AEKFRFCTYL LADATADFGD LIVPFAEREH
EEMQVTAFYT LGKLKNKSDF LETFIKGLNA SSNRVIHSAL QALSDVYDIR LLQHYKRIAE
KFPEEKDYIL SNLNHRLAAY GLNNKTILLK NDLGE