Gene Cpin_1313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1313 
Symbol 
ID8357431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1570015 
End bp1571019 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content47% 
IMG OID644963471 
Producthypothetical protein 
Protein accessionYP_003121012 
Protein GI256420359 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.805191 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCCA TCCGAATGGC CCTTGCATGC CTGCTCTTAT TAGGCTGCTT CCTGACAAAC 
TGTAAACAGG AAACCAAAAT CACTCCTACA TCTGACATTC CATCTGAAGA TCTTGACAAA
ATCGCCCGTG CCGGTTTTAG TACTTACAAT GTAATAGATG TAGACAGTGG TTATGTGGTG
GAAGGTGATA TCTTCCTGAA ATATGATTAC CTGGATACAA AACCTAATTC TCCCATCCTC
CGCATCGCTG AAAGCGAACA GTATCATACA TATGCACTGG TAACAGGTAC ACCAAGGGTG
ATTTCCATTT CACTGACTGC CGGATTATCC ACTGTATTCA CAACAGCACT TGATGAAGCG
ATTGCCCGTT ACAATGCACT TGGATTGAAA CTCTCTTTCC AACGCGTCAG CAGTGGTGGC
AACATCAACA TCACCACCTT CTACCAGGGT CCAAATGCTG ATGGCAGTAT TGTTTTAGGT
AGCTCAGGAT TCCCATCCGG TGGCAACCCC TATAGCTCCA TCACATTGAA TACGCATCCA
CAGGCATATG GCAGTAATCC TGACATGTTG TACCTCGCTT CCGTTATCCA GCACGAAGTG
GGTCACTGTA TCGGGTTCCG TCATACCGAT TACTTCAACC GTAACTACAG CTGTAATTAC
AGTACCAATC CAAACGAAGG TGAAGCCGGC ATCGGTGCGG TACACATTCC CGGTACGCCA
ACAGCTGAAG ATCCTAATAG CTTTATGCTG GCCTGTACGG TGTTCGGACT TAACCGTTCC
TTCAACACCA ATGACGTCAT TGCGCTGCAA TCCCTCTATG GCTCCTGTGA CCGTGTAGAT
CAGCGTTATA TTAATGGCGT TTGTGAAACC GCTCAAATAG AGTTAACTAA TGTGACAGAG
GCTCCAAGAG GCTACGTCTG CTCTTACAGC TATGTATGGA GTGATGGCTC AGAAGTTCCT
TACAAAACGG TCAGAACGGC GCAGGGTTGT CCTTCCAACC CCTGA
 
Protein sequence
MKPIRMALAC LLLLGCFLTN CKQETKITPT SDIPSEDLDK IARAGFSTYN VIDVDSGYVV 
EGDIFLKYDY LDTKPNSPIL RIAESEQYHT YALVTGTPRV ISISLTAGLS TVFTTALDEA
IARYNALGLK LSFQRVSSGG NINITTFYQG PNADGSIVLG SSGFPSGGNP YSSITLNTHP
QAYGSNPDML YLASVIQHEV GHCIGFRHTD YFNRNYSCNY STNPNEGEAG IGAVHIPGTP
TAEDPNSFML ACTVFGLNRS FNTNDVIALQ SLYGSCDRVD QRYINGVCET AQIELTNVTE
APRGYVCSYS YVWSDGSEVP YKTVRTAQGC PSNP