Gene Cpin_1312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1312 
Symbol 
ID8357430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1568861 
End bp1569904 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content42% 
IMG OID644963470 
Producthypothetical protein 
Protein accessionYP_003121011 
Protein GI256420358 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.667333 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACAAC ATCTGAGACA TGAAAAGAAC TGTCTGAACT GTGGAGCAAC CGTAGAAGAC 
AGGTATTGCA GTCACTGCGG ACAGGAGAAT ATCGTTGTTA AAGAGTCTTT TGGACACCTT
TTCAGACATT TTTTTGAGGA CGTTACACAC TACGATTCCA AGTTTTTTAC AACTATAAAG
GACCTGGTAT TTAAGCCGGG TTTTCTTACA AAGGAATATC TTTCCGGTCG CAGGGCGAGT
TATCTGCATC CTATCCGGAT GTATGTATTT ATCTCCTTCC TGTATTTTCT GGCCGCTTTT
ACCTTTAGAC ATTCCAACTT TAAACTTGAA GAAATAACAC AAGAAAGGAC CATAATGGCG
GCCAAAAAGG AGGTAGCGGA TAGTCTGCTA CAGATCCTGC AGGAAACGGG CAATAAGACG
CCTGTAGATA GCATTAAATC TGCAGCATTG GCGGGCACGA TCAGCAGATT GCGGCTGGAT
ACTATTCATG TGAAGGAAAT TAAATTCAAT GTAGTTGGTA ATATTGATTA TCAACTTCTG
AAAGAATATC ATGAAGGGCA AATGGCGTTG CCGGCAGAAA GAAGAGATAA AGGAATAAAA
CCATGGTTGT ATAGCCGCTG GTTTGCCACA ATTGAACATC ACGGAGAAGC TGCGGTGGAA
TTACTGATCG AAAAGACGCA ACACGCGATT CCAAAGCTGA TGTTCCTTTT ACTGCCTTTG
TTTGCATTGA TATTAAAACT GTTCTACAAC AAAAAGAAAT ACTATTATGG AGATCACGCG
ATCTTTTCGC TGCATTTCCA TTCTGCAGCG TTTCTACTGT TTTTTATCAT TGCATTACTG
AATAAGGTAG TACCGGCGGT TGCGACTTTC CTTTCTTCGC TGGAGCTGTT TCTGCTGATC
GCCTATATGA CGATCGCCCT GAAGAATGCT TATCAGCAAT CATTTTTCCT ATCGCTGGTA
AAAGCGATTG GCCTGAGTGT CATCTATGGC ATCTTCATCG CGGCTGGTTT TGCTATTATC
GCATTAAGTG CGCTTATCAT GTAA
 
Protein sequence
MSQHLRHEKN CLNCGATVED RYCSHCGQEN IVVKESFGHL FRHFFEDVTH YDSKFFTTIK 
DLVFKPGFLT KEYLSGRRAS YLHPIRMYVF ISFLYFLAAF TFRHSNFKLE EITQERTIMA
AKKEVADSLL QILQETGNKT PVDSIKSAAL AGTISRLRLD TIHVKEIKFN VVGNIDYQLL
KEYHEGQMAL PAERRDKGIK PWLYSRWFAT IEHHGEAAVE LLIEKTQHAI PKLMFLLLPL
FALILKLFYN KKKYYYGDHA IFSLHFHSAA FLLFFIIALL NKVVPAVATF LSSLELFLLI
AYMTIALKNA YQQSFFLSLV KAIGLSVIYG IFIAAGFAII ALSALIM