Gene Cpin_1289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1289 
Symbol 
ID8357405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1539495 
End bp1541120 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content46% 
IMG OID644963445 
ProductAldehyde Dehydrogenase 
Protein accessionYP_003120988 
Protein GI256420335 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.657181 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTTG AAGAACAATT ACACCAAATG TTCCCTACAG CTGACGCAAT TCCAGCCGAA 
TACAGGCTGG AGAAGGAAGT ACATCAGCGG GAATACCTTT CAGGTGGTGA GATGAAACCA
TGGAATGGCG ATGTGCATAC AGTGTTATCT CCGATCTGTA TTCAGACAGC CAACGGACTG
GAGAGAAAAG TGATTGGTTC CTATCCTTTA TGTGGCCCGG AAGAGGCGAT GGCCGCGCTG
GATGCAGCAG TACTCGCCTA CAATGACGGT CGCGGAGAAT GGCCTACAAT GCCGGTTCCT
GAACGTATTG CCTGTATGGA GAAATTCACG GGTAAGATGA TCGAAAAGAA ACCGGAGATC
GTTCAACTCA TTATGTGGGA GATCGGTAAA TCTTATGCCG ATTCCGTTAA AGAGTTTGAC
CGTACTATCG AATATATCAA CACGACCATA GACGCACTTA AAGATCTGGA CCGCAACTCC
AGCCGCTTTG AAATTGAACA GGGTATTATC GCCCAGATCA GGCGTTCTCC ATTGGGCGTA
GTGCTTTGTA TGGGACCATT CAACTACCCG CTGAATGAAA CCTTTACCAC GCTGATCCCT
GCGCTGATCA TGGGGAATAC AATACTGTTC AAACCACCGA AACACGGTAC TTTATTACAC
TATCCACTGC TGGAAGCTTT TGCCAGCTGT TTCCCGAAAG GTGTTGTAAA TACCATCTAC
GGTCGTGGTA ACGTAATTAT CGGTCCGTTG ATGGAAACGG GTAAGATCAA TGTCCTGACA
CTGATAGGTA GCAGTAGGGT GGCTAATCAG CTGAAGAAAA TGCACCCGAA AGTAAACCGT
CTGAGAGCCA TCCTCGGACT GGATGCTAAA AATGCTGCTA TTATCTCTGA TAAGGCGGAT
CTTGACCTTG CGGTACAGGA AACGGTACTG GGTTCATTGT CATTTAACGG ACAGCGTTGT
ACTGCCCTGA AGATCATATT TGTGCACAGC AAAGTGGCAG ATGTATTCCT GCAGAAACTC
AGTGCCGCTA TCAGCCAGCT GAAAATCGGT ATGCCATGGG AAAAAGGCGT GTTCCTGACC
CCATTACCAG AACCGCAGAA ACCGGCTTAC CTGAAGGAGT GTATTGATGA CGCCATTGCC
AACGGCGCAA AGATCATCAA TGAAAACGGC GGTGCTGCCT ATGAATCATT CGTGTACCCG
GCGGTGTTAT ATCCGGTAAA CGATAAGATG AAATTATACA GAGAGGAGCA ATTTGGTCCG
GTAATTCCAG TCATCCCATT TGATGATATC GAAACGCCGA TCGAATACCT GATTGAATCA
GATCATGGTC AGCAGGTAAG CCTGTTCTCC AATGATGCTG ACGAACTGGC TTCGCTGATA
GATCCGCTGG TGAACCAGGT AAGCCGCGTT AATATCAATT GCCAGTGTCA GCGTGGTCCC
GACGTATATC CGTTCACAGG ACGTAAGGAT TCTGCAGAAG GTACATTAAG TGTACCAGAT
GCATTGCGTG CATTTTCGAT TCGTTCAATG GTTGCCACAA AACAATCGGA AATGAACAAA
AATTTGCTCA ATCGAATCGT AAATGATCAG ACTTCAAACT TTTTATCAAC AAAATATATA
TTCTGA
 
Protein sequence
MSFEEQLHQM FPTADAIPAE YRLEKEVHQR EYLSGGEMKP WNGDVHTVLS PICIQTANGL 
ERKVIGSYPL CGPEEAMAAL DAAVLAYNDG RGEWPTMPVP ERIACMEKFT GKMIEKKPEI
VQLIMWEIGK SYADSVKEFD RTIEYINTTI DALKDLDRNS SRFEIEQGII AQIRRSPLGV
VLCMGPFNYP LNETFTTLIP ALIMGNTILF KPPKHGTLLH YPLLEAFASC FPKGVVNTIY
GRGNVIIGPL METGKINVLT LIGSSRVANQ LKKMHPKVNR LRAILGLDAK NAAIISDKAD
LDLAVQETVL GSLSFNGQRC TALKIIFVHS KVADVFLQKL SAAISQLKIG MPWEKGVFLT
PLPEPQKPAY LKECIDDAIA NGAKIINENG GAAYESFVYP AVLYPVNDKM KLYREEQFGP
VIPVIPFDDI ETPIEYLIES DHGQQVSLFS NDADELASLI DPLVNQVSRV NINCQCQRGP
DVYPFTGRKD SAEGTLSVPD ALRAFSIRSM VATKQSEMNK NLLNRIVNDQ TSNFLSTKYI
F