| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1247 |
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| Symbol | |
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| ID | 8357363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1492267 |
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| End bp | 1492974 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644963403 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_003120946 |
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| Protein GI | 256420293 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.464606 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTTT TACTAATAGA AGATGAACCG TCGGTAGTCT CCTTTATACG GCGCTATCTT
GCAGAAGCCG GCTATGATGT CAGTGTTGCA CTGGATGGTC AGTCGGGACT ACAGATGGCC
ACCGAAAATA ACTTTCAGCT GATCATCCTC GATGTCATGC TGCCGGGTAT GAACGGTATT
GCCGTGTGTA AGGCTTTGCG ACAACAACAA TTAACCACGC CTATCCTTAT GCTGACCGCT
TTGGGCTCCA CCGAAAACGT AGTGGCAGGC CTTGACAGCG GTGCTGACGA CTATCTGGTA
AAACCGTTCA AACAGGCCGA ATTACTGGCC CGTATCCGCT CCCTGCTGCG TCGTAACAAT
GACACAGCTG CCGCAGCTAC ACCAGCTGTA ACACAGAGTA ACGGTAATGT GCTGAAAGTA
GCCGATCTGG AACTGGACCT CAATACCAAA AGCGCCAGCA GATACGGACA AACCATTGTG
CTGACCGCTA CCGAATACCG GCTGCTGGAA TATATGATGC GCAATCCCAA AAGGGTATTA
TCCAGGATGG AAATACTGGA AAACGTCTGG GGCGTTGACT TTAATATGAA TACCAAAGTA
GTGGACGTAT ACGTCAATTA CCTGCGTAAA AAAGTAAACC GCAAAGACCA GCCGGCACTG
ATACAGACAG TGGTCGGTAT GGGATATATG CTTAAAGAAG AAGAATGA
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| Protein sequence | MKLLLIEDEP SVVSFIRRYL AEAGYDVSVA LDGQSGLQMA TENNFQLIIL DVMLPGMNGI
AVCKALRQQQ LTTPILMLTA LGSTENVVAG LDSGADDYLV KPFKQAELLA RIRSLLRRNN
DTAAAATPAV TQSNGNVLKV ADLELDLNTK SASRYGQTIV LTATEYRLLE YMMRNPKRVL
SRMEILENVW GVDFNMNTKV VDVYVNYLRK KVNRKDQPAL IQTVVGMGYM LKEEE
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