Gene Cpin_1187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1187 
Symbol 
ID8357303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1413299 
End bp1414129 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content42% 
IMG OID644963343 
Producthypothetical protein 
Protein accessionYP_003120886 
Protein GI256420233 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAAA CATTAGCACT GATAGTATTA GGTATTGTAA GCACGGGACT CTTTTCATGC 
AGGCATAGCC GCCAGATAGC AGGTACGTCT TTTCCGGTAA CGGATACCAC TCATCATCAG
GCATCAGCAG CAGACAGCGC ATCCATTGCT GCTGCAAATA CTTTTAATAA AGAAATGCTC
GCAAAACTGC GGGGTAACTA TATCAATTTT ACCACCTTCT CCGCCAAATT AAAGGTTGAT
TTCGAAACGG AAGCCAAACA AATGTCAGGC ATTAACGCTA ACATGCGTCT GCATAAAGAC
AGCATCATCT GGATATCCGT ATCTGTACCG ATCATCGGAG AAGTAGCCAG GGCGATTATC
ACTCCGGACA GTCTGAAAGC GATTGATAAG TTTCATAAAG TGGCATATCT CCGTGATATG
AACAACGCAA AAGATCTGTT GAATATTCCC TTTGATTTCA AGACCTTACA GGACCTGATC
ATCGGTAATC CTATCTATCT GACGGACTCA GTATACCAGG TTGTAAAGAC ACCTTCCGTG
ATCTCTTTCA CCTGCGATAG TACCATGTTC ACAAGTCTGT TCAATGTGTT TGCTGATGAC
TATGTATTGC AACAAAGTAA GGTGATGGAT AAGGATAGTA CACGCAGGCG GTCTATCGAA
CTCACCTATG GTGAATACAA ATCATTGGAT AAAGTTAAAT TTGCTACCCT CAGGCGGGTT
TTTGTGGAAG AGAAGAACTA CACAAAGATC AATATGGAAT TTAACAAAAT AGATTTCGAA
CAGCCGTTAA GCTTTCCATT CACCATTCCC TCTGGTTATT CAAGAGAGTA G
 
Protein sequence
MKQTLALIVL GIVSTGLFSC RHSRQIAGTS FPVTDTTHHQ ASAADSASIA AANTFNKEML 
AKLRGNYINF TTFSAKLKVD FETEAKQMSG INANMRLHKD SIIWISVSVP IIGEVARAII
TPDSLKAIDK FHKVAYLRDM NNAKDLLNIP FDFKTLQDLI IGNPIYLTDS VYQVVKTPSV
ISFTCDSTMF TSLFNVFADD YVLQQSKVMD KDSTRRRSIE LTYGEYKSLD KVKFATLRRV
FVEEKNYTKI NMEFNKIDFE QPLSFPFTIP SGYSRE