Gene Cpin_1180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1180 
Symbol 
ID8357296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1402975 
End bp1403436 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content45% 
IMG OID644963336 
ProductPeroxiredoxin 
Protein accessionYP_003120879 
Protein GI256420226 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACATT TGAAAGAAGG GGACAAAGCG CCCATATTCA AGGGCATTGA CCAGGAAGGA 
AAGCAGGTAT CCCTGACAGA TCTGAAAGGA AAGAAAGTGA TCCTCTATTT TTATCCGAAA
GACATGACGC CGGGGTGTAC AGCCCAGGCA TGTAACCTGA GAGATAATTA CCAGGCCTTG
CTGAAAAAGG GATTTGCAGT AGTAGGCGTC AGTACGGACA GCGAGAAAAG GCATCAGAAG
TTTACCGAGA AATATGAGCT GCCTTTCCCC TTACTGGCAG ACGAGGACAG AATGATACAT
ACACAGTATG GCGTGTGGGG AGAGAAGAAG TTCATGGGAC GCATTTTTGA CGGCACACAT
CGTACGACTT TCCTGATCAA CGAAAAGGGT GTGATTGATA AGATTATCGT GAAGCCTGAT
ACAAAGAATC ATACAGAAGA GATCCTTGAG ATCTGGCAAT AA
 
Protein sequence
MTHLKEGDKA PIFKGIDQEG KQVSLTDLKG KKVILYFYPK DMTPGCTAQA CNLRDNYQAL 
LKKGFAVVGV STDSEKRHQK FTEKYELPFP LLADEDRMIH TQYGVWGEKK FMGRIFDGTH
RTTFLINEKG VIDKIIVKPD TKNHTEEILE IWQ