Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1165 |
Symbol | |
ID | 8357281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 1388944 |
End bp | 1389612 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644963321 |
Product | stress protein |
Protein accession | YP_003120864 |
Protein GI | 256420211 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2310] Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAATTA ATTTAGTTAA GGGACAAACC ATTGACCTCC GCAAAAATGA TAAAGGTGAA AGCTTCGATC TGTCAACTGT AACCATTGGT CTTGGTTGGG ACGTGCGTAA AAAAAGCGGC GGCTTTTTTG GCAAACTTTT AGGTGGTAAG GAAGAGGAAT TTGATCTGGA TGCTATTGCG TTCCTGCTTG ATAAAAATGG TAAAGTAGCT GACTTAGGTA AAACCGTACA GACAAACGAC GGTCGTAACC TGAGCCTGTA CCAGGGAGAT GTGATCTTCT TCAACAGTCA GCGTCATCCG TCAGGCAATA TCTGGCTGAC AGGCGATAAC CGTACCGGCG CCGGCGATGG CGATGATGAG CAGATCATTG TGAAACTGGA TAGCCTGGAC GCGAAATATG AGAAGATCCT TTTCATCGTA TCTGTCTACC AGGGCCGTCA GCGTAACCAG CACTTCGGTG GTATCGAAAA CGCTTTCATC CGCGCAGTAG ATAACAGCGG AAAAGAGATC GCTAAATTTA ACCTCTCCGG AGACGCTTCA TATAACAATA TGTGCTCACT GGTATTTGCA GAAGTATACC GTAATAACGG TACCTGGAAA TTCAGAGCAC TGGGAGATCC TCAGCCAGCT GATAGCTTCG TGGAAATCCT GCGGAACTAT GTTTATTAA
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Protein sequence | MAINLVKGQT IDLRKNDKGE SFDLSTVTIG LGWDVRKKSG GFFGKLLGGK EEEFDLDAIA FLLDKNGKVA DLGKTVQTND GRNLSLYQGD VIFFNSQRHP SGNIWLTGDN RTGAGDGDDE QIIVKLDSLD AKYEKILFIV SVYQGRQRNQ HFGGIENAFI RAVDNSGKEI AKFNLSGDAS YNNMCSLVFA EVYRNNGTWK FRALGDPQPA DSFVEILRNY VY
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