Gene Cpin_1165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1165 
Symbol 
ID8357281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1388944 
End bp1389612 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content46% 
IMG OID644963321 
Productstress protein 
Protein accessionYP_003120864 
Protein GI256420211 
COG category[T] Signal transduction mechanisms 
COG ID[COG2310] Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATTA ATTTAGTTAA GGGACAAACC ATTGACCTCC GCAAAAATGA TAAAGGTGAA 
AGCTTCGATC TGTCAACTGT AACCATTGGT CTTGGTTGGG ACGTGCGTAA AAAAAGCGGC
GGCTTTTTTG GCAAACTTTT AGGTGGTAAG GAAGAGGAAT TTGATCTGGA TGCTATTGCG
TTCCTGCTTG ATAAAAATGG TAAAGTAGCT GACTTAGGTA AAACCGTACA GACAAACGAC
GGTCGTAACC TGAGCCTGTA CCAGGGAGAT GTGATCTTCT TCAACAGTCA GCGTCATCCG
TCAGGCAATA TCTGGCTGAC AGGCGATAAC CGTACCGGCG CCGGCGATGG CGATGATGAG
CAGATCATTG TGAAACTGGA TAGCCTGGAC GCGAAATATG AGAAGATCCT TTTCATCGTA
TCTGTCTACC AGGGCCGTCA GCGTAACCAG CACTTCGGTG GTATCGAAAA CGCTTTCATC
CGCGCAGTAG ATAACAGCGG AAAAGAGATC GCTAAATTTA ACCTCTCCGG AGACGCTTCA
TATAACAATA TGTGCTCACT GGTATTTGCA GAAGTATACC GTAATAACGG TACCTGGAAA
TTCAGAGCAC TGGGAGATCC TCAGCCAGCT GATAGCTTCG TGGAAATCCT GCGGAACTAT
GTTTATTAA
 
Protein sequence
MAINLVKGQT IDLRKNDKGE SFDLSTVTIG LGWDVRKKSG GFFGKLLGGK EEEFDLDAIA 
FLLDKNGKVA DLGKTVQTND GRNLSLYQGD VIFFNSQRHP SGNIWLTGDN RTGAGDGDDE
QIIVKLDSLD AKYEKILFIV SVYQGRQRNQ HFGGIENAFI RAVDNSGKEI AKFNLSGDAS
YNNMCSLVFA EVYRNNGTWK FRALGDPQPA DSFVEILRNY VY