| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1143 |
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| Symbol | |
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| ID | 8357259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1363897 |
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| End bp | 1365264 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644963299 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003120842 |
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| Protein GI | 256420189 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0286987 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.128527 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTTG ACAAAAAGCA CGCAGGTTTG ACAGGACTCC TGCTGCTGAT GATCTTTCAC
TGTGCGATGG CCCAGCAGCC CGCAAAAGCG CCGCTGCAGG AAACTATCTC ACTGTCTGCA
CAACAGGCGG TAGATTACGC ACTTGCCAAC CAGGCTTCCG TACGCTCGGC TAAACTGGAT
GAACTGATCC AGCTGGCCAA GAACAAAGAA GTAAGCGGTA TGGCATTGCC TACGCTTGCC
GGTTCAGGCA CTTATCAGCA TAACCCTATT GTACAGAAAC AACTGATAGA CGCGTCCAAC
TTTAGCGACA CCGTTCCCAA AGGTACACTG GTGCCTTTCT CATTCGGTCT GAAGTACAAC
GTGATCGGAG AAATTACCCT GAAACAGGTA TTGTTCGACC CAAGTGTACT GGTGGCTTTA
CAAGCCAGAG AAACACTGGA ACAGCTGGCT TCCAAATCAG TAAAGAAATC AGAAGTAGAT
GTGAAAGTAG GCGTTTATAA AGCCTATTAT AACGTGCTCT CCGCCCGCAG AGGTCTGGAG
ATACTCGGCA ATAACATCAA AAATCTGGAC AAACTGCTGA ACGAAACCAA AGAGACTTAT
AAAAATGGTC TGGTGGAAAA GCTGGATGTA GACAGATTGG TCGTACAGCT GACAAACCTT
CGTACAGAAG AAACAAAGCT ACGCAATGTG ACCGAAGTAG GTCTTGCTGC ACTGAAATAT
CAGATGGGGA TGGCAATTCA GCAGCCAATC CAGCTGACAG ATACCTTGTC AACCGCTGAG
ATTAAATCTG CGATCGCTTC GGAACAATTT GACTATGGAC AGCGTATAGA ATATCAGTTG
CTCCAGACGC AGAAGAAAGC ATATGAGTAT GATCTGAAAC GCTACAAGTT CCAGACACTG
CCGACCCTGT CATTGTTTGG TACCGGCGGT ATGAGCCGCG CAAGTGATCA GTTCAACTAC
TTCAACCGTG AAACATGGTA TGGTTATGTA TCCTATGGTG TAAACCTGTC CTTTACCATT
TTCAGTGGTA TGCAGCGCAG ACGCAAGGAA GATCAGGCTT TCCTTCAGGT GAAAAAAGCA
GAACTGTCAC TGGAAAATAC CAAACTGGGT ATTGATATGG AACAGGCGCA GTCCACTTCC
AGCTTACGGA ATAACATCCT GACACTGGAA GCGCAGGAAA GCAATATGCA ACTGGCAGAA
GAAGTATACA ATACCACACA GATCAAATAT CGTGAAGGTG TTGGCTCCAG CCTGGAAATG
AGCACTGCTG AAAATGAACT GCTCACTGCA CAGAATAACT ACTTCACTGC GTTGTATAAT
GCGGCAGTAG CAAAAGTAGA TTACCTGAAA GCATACGGAA AACTGTAA
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| Protein sequence | MQLDKKHAGL TGLLLLMIFH CAMAQQPAKA PLQETISLSA QQAVDYALAN QASVRSAKLD
ELIQLAKNKE VSGMALPTLA GSGTYQHNPI VQKQLIDASN FSDTVPKGTL VPFSFGLKYN
VIGEITLKQV LFDPSVLVAL QARETLEQLA SKSVKKSEVD VKVGVYKAYY NVLSARRGLE
ILGNNIKNLD KLLNETKETY KNGLVEKLDV DRLVVQLTNL RTEETKLRNV TEVGLAALKY
QMGMAIQQPI QLTDTLSTAE IKSAIASEQF DYGQRIEYQL LQTQKKAYEY DLKRYKFQTL
PTLSLFGTGG MSRASDQFNY FNRETWYGYV SYGVNLSFTI FSGMQRRRKE DQAFLQVKKA
ELSLENTKLG IDMEQAQSTS SLRNNILTLE AQESNMQLAE EVYNTTQIKY REGVGSSLEM
STAENELLTA QNNYFTALYN AAVAKVDYLK AYGKL
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