Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1140 |
Symbol | |
ID | 8357256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 1360961 |
End bp | 1361902 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644963296 |
Product | hypothetical protein |
Protein accession | YP_003120839 |
Protein GI | 256420186 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.094752 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.114098 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCATA TCTTTCTGGC GTTCTGCCTG CACGTGATTA CTATTCCTGT TTACGGATGG GGCTTCTTCG CTCATCAGCG CATTAACCGC CTGGCAGTAT TTTCTCTGCC TCCGGAGATG CTGGTATTCT ATAAACCTAA TATTGAATAC CTCTCCACAC ACGCGACAGA TGCAGATAAA AGAAGATATA TCATCCCGGA AGAAGGGCCA CGGCATTACA TCGACATAGA TCATTACGGC CAGGCGCCAT TTGCCGCGCT ACCAAGATCC TGGGAGGAAG CACTGTTAAA ATATACTGCG GATACATTGC AGACATATGG CATTTTACCC TGGTATCTTA CACAAATGCT CTCCCGTTTG ACACAGGCAT TTAAAGACAA GGATCCTGAC AGGATCATGC GGCTAAGCGC TGACATCGGC CACTATGCAG GCGATGCCCA TGTACCGTTA CATGCCTGTT CAAATCACAA CGGACAACGC ACAGGGCAGC AGGGAATACA CGGACTGTGG GAATCCCGCA TCCCCGAATT GATGGCTGAT AAGACCTTTC AATACCTCTC TGCGAAGGCA TACTATATAA AAGATATTAA TGCATACACC TGGCAGATAG TGCTGGAAAG CGCTGCAGCT GCGGATACGG TGTTACAGCA GGAAAAATTA GTAAGTGACA GATTCCCTTC CGGCAGGAAA TTTGCGTATG AAAAACGCAA CGGGAAACTG ATACGAAATT ACGCAACAGC CTACGCGAAA GCCTATCATG GCGCATTAGG AGACATGATA GAACGTAGAA TGAGCGCCGC AATCTCAGCT ACAGCCAACT ACTGGTATAC CGCCTGGATT AATGCAGGAA TGCCGGTGCT GAATAACCTC AAAAAAGGTA GCCGTACACA AGATCCCGTT CATCCCACAC CTGAGCGCAT GATAGGCCGG CAGGAAGCCT GA
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Protein sequence | MHHIFLAFCL HVITIPVYGW GFFAHQRINR LAVFSLPPEM LVFYKPNIEY LSTHATDADK RRYIIPEEGP RHYIDIDHYG QAPFAALPRS WEEALLKYTA DTLQTYGILP WYLTQMLSRL TQAFKDKDPD RIMRLSADIG HYAGDAHVPL HACSNHNGQR TGQQGIHGLW ESRIPELMAD KTFQYLSAKA YYIKDINAYT WQIVLESAAA ADTVLQQEKL VSDRFPSGRK FAYEKRNGKL IRNYATAYAK AYHGALGDMI ERRMSAAISA TANYWYTAWI NAGMPVLNNL KKGSRTQDPV HPTPERMIGR QEA
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