Gene Cpin_1140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1140 
Symbol 
ID8357256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1360961 
End bp1361902 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content48% 
IMG OID644963296 
Producthypothetical protein 
Protein accessionYP_003120839 
Protein GI256420186 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.094752 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.114098 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCATA TCTTTCTGGC GTTCTGCCTG CACGTGATTA CTATTCCTGT TTACGGATGG 
GGCTTCTTCG CTCATCAGCG CATTAACCGC CTGGCAGTAT TTTCTCTGCC TCCGGAGATG
CTGGTATTCT ATAAACCTAA TATTGAATAC CTCTCCACAC ACGCGACAGA TGCAGATAAA
AGAAGATATA TCATCCCGGA AGAAGGGCCA CGGCATTACA TCGACATAGA TCATTACGGC
CAGGCGCCAT TTGCCGCGCT ACCAAGATCC TGGGAGGAAG CACTGTTAAA ATATACTGCG
GATACATTGC AGACATATGG CATTTTACCC TGGTATCTTA CACAAATGCT CTCCCGTTTG
ACACAGGCAT TTAAAGACAA GGATCCTGAC AGGATCATGC GGCTAAGCGC TGACATCGGC
CACTATGCAG GCGATGCCCA TGTACCGTTA CATGCCTGTT CAAATCACAA CGGACAACGC
ACAGGGCAGC AGGGAATACA CGGACTGTGG GAATCCCGCA TCCCCGAATT GATGGCTGAT
AAGACCTTTC AATACCTCTC TGCGAAGGCA TACTATATAA AAGATATTAA TGCATACACC
TGGCAGATAG TGCTGGAAAG CGCTGCAGCT GCGGATACGG TGTTACAGCA GGAAAAATTA
GTAAGTGACA GATTCCCTTC CGGCAGGAAA TTTGCGTATG AAAAACGCAA CGGGAAACTG
ATACGAAATT ACGCAACAGC CTACGCGAAA GCCTATCATG GCGCATTAGG AGACATGATA
GAACGTAGAA TGAGCGCCGC AATCTCAGCT ACAGCCAACT ACTGGTATAC CGCCTGGATT
AATGCAGGAA TGCCGGTGCT GAATAACCTC AAAAAAGGTA GCCGTACACA AGATCCCGTT
CATCCCACAC CTGAGCGCAT GATAGGCCGG CAGGAAGCCT GA
 
Protein sequence
MHHIFLAFCL HVITIPVYGW GFFAHQRINR LAVFSLPPEM LVFYKPNIEY LSTHATDADK 
RRYIIPEEGP RHYIDIDHYG QAPFAALPRS WEEALLKYTA DTLQTYGILP WYLTQMLSRL
TQAFKDKDPD RIMRLSADIG HYAGDAHVPL HACSNHNGQR TGQQGIHGLW ESRIPELMAD
KTFQYLSAKA YYIKDINAYT WQIVLESAAA ADTVLQQEKL VSDRFPSGRK FAYEKRNGKL
IRNYATAYAK AYHGALGDMI ERRMSAAISA TANYWYTAWI NAGMPVLNNL KKGSRTQDPV
HPTPERMIGR QEA