Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1130 |
Symbol | |
ID | 8357246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 1349381 |
End bp | 1350106 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644963286 |
Product | hypothetical protein |
Protein accession | YP_003120829 |
Protein GI | 256420176 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.826453 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.396679 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGGAAGA CAAATCCGGT TACATTATCC ATTCCACAAG CCTGTCATGA ATCCTGGCAG GATATGCCCC CTAATGAAAA AGGAAGATTC TGTCAACACT GTCAGAAAAC AGTAATTGAC TTTACAAATA TGAGTGATCA TGAAATAGCC AGACTGGTGA ACCGTTCAAA AGGGCAGCTC TGCGGACGAC TTCATGTTTC ACAACTTGAC AGGGAAATCT ATACCACTAA AAAAAATACA CCGTGGATGA AAATTGCGGC GATGGTATCA GCGCTGACAT TAACAACACC AGCGGTGAGC GCAAAAGCGG CAGCTATAGC AACAGTCCAG CTGAATGAAA AGGAAGATAT CATTGCCAAG GGTGATACAA CAATTGTTAT TTCAGGTCAG GTAGTTGATA CTACAGCAGC CCGTATACCA TTACCAGGTG TAGATATTGT CCTGAAAGGT GGAAAGATAA GGACCATTAC AAATGAGACT GGAGCATTCA TGCTTCATCT ACCCGCTGAC ATAAAGAAAG AAGACCTGCT GCTGGTAATT TCTTTCATTG GTTACCAAAC ACAGGTTTTG CCGATATCAT CAGCTGAACT GCAACAAAAT ATCGTCGTTA CCTTAGTACC GGAGCAATTT GATGGCGAAG GGGTAGTATT GGGCGGAGTT CATTCCTGGA GACCGTCTAC TGTATGGCAA AGATTTAAAT ATAAGATAGG TTCTTTGTTC CATTAG
|
Protein sequence | MRKTNPVTLS IPQACHESWQ DMPPNEKGRF CQHCQKTVID FTNMSDHEIA RLVNRSKGQL CGRLHVSQLD REIYTTKKNT PWMKIAAMVS ALTLTTPAVS AKAAAIATVQ LNEKEDIIAK GDTTIVISGQ VVDTTAARIP LPGVDIVLKG GKIRTITNET GAFMLHLPAD IKKEDLLLVI SFIGYQTQVL PISSAELQQN IVVTLVPEQF DGEGVVLGGV HSWRPSTVWQ RFKYKIGSLF H
|
| |