Gene Cpin_1130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1130 
Symbol 
ID8357246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1349381 
End bp1350106 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content42% 
IMG OID644963286 
Producthypothetical protein 
Protein accessionYP_003120829 
Protein GI256420176 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.826453 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.396679 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGAAGA CAAATCCGGT TACATTATCC ATTCCACAAG CCTGTCATGA ATCCTGGCAG 
GATATGCCCC CTAATGAAAA AGGAAGATTC TGTCAACACT GTCAGAAAAC AGTAATTGAC
TTTACAAATA TGAGTGATCA TGAAATAGCC AGACTGGTGA ACCGTTCAAA AGGGCAGCTC
TGCGGACGAC TTCATGTTTC ACAACTTGAC AGGGAAATCT ATACCACTAA AAAAAATACA
CCGTGGATGA AAATTGCGGC GATGGTATCA GCGCTGACAT TAACAACACC AGCGGTGAGC
GCAAAAGCGG CAGCTATAGC AACAGTCCAG CTGAATGAAA AGGAAGATAT CATTGCCAAG
GGTGATACAA CAATTGTTAT TTCAGGTCAG GTAGTTGATA CTACAGCAGC CCGTATACCA
TTACCAGGTG TAGATATTGT CCTGAAAGGT GGAAAGATAA GGACCATTAC AAATGAGACT
GGAGCATTCA TGCTTCATCT ACCCGCTGAC ATAAAGAAAG AAGACCTGCT GCTGGTAATT
TCTTTCATTG GTTACCAAAC ACAGGTTTTG CCGATATCAT CAGCTGAACT GCAACAAAAT
ATCGTCGTTA CCTTAGTACC GGAGCAATTT GATGGCGAAG GGGTAGTATT GGGCGGAGTT
CATTCCTGGA GACCGTCTAC TGTATGGCAA AGATTTAAAT ATAAGATAGG TTCTTTGTTC
CATTAG
 
Protein sequence
MRKTNPVTLS IPQACHESWQ DMPPNEKGRF CQHCQKTVID FTNMSDHEIA RLVNRSKGQL 
CGRLHVSQLD REIYTTKKNT PWMKIAAMVS ALTLTTPAVS AKAAAIATVQ LNEKEDIIAK
GDTTIVISGQ VVDTTAARIP LPGVDIVLKG GKIRTITNET GAFMLHLPAD IKKEDLLLVI
SFIGYQTQVL PISSAELQQN IVVTLVPEQF DGEGVVLGGV HSWRPSTVWQ RFKYKIGSLF
H