Gene Cpin_1115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1115 
Symbol 
ID8357230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1334091 
End bp1334381 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content48% 
IMG OID644963270 
Producthypothetical protein 
Protein accessionYP_003120814 
Protein GI256420161 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.309031 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACAA CGACGCAACG TGATGAACGA CTCTGGAAGA TTGCTAAATC AAGAGCAGCT 
TTCAGAAACT CCCTGCTCAT TTATCTGATT ATGAATGCCT TTTTCTGGGT GCTCTGGTTT
GTTACACAAG GACCAGGACA CCACGGCACA CCATGGCCTG TATGGCCGGC ACTGGGCTGG
GGACTTGGAC TGGCATTCCA GTATTTTAAT GCATGGCATC GCGACCCGTT TGGTGATGCT
GTGAAAGAAT ATGAAAAACT GCAGGAAGAA AAGCAGCGCA GAGGCGTATA A
 
Protein sequence
METTTQRDER LWKIAKSRAA FRNSLLIYLI MNAFFWVLWF VTQGPGHHGT PWPVWPALGW 
GLGLAFQYFN AWHRDPFGDA VKEYEKLQEE KQRRGV