Gene Cpin_1111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1111 
Symbol 
ID8357225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1329151 
End bp1329921 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content49% 
IMG OID644963265 
Producthypothetical protein 
Protein accessionYP_003120810 
Protein GI256420157 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0805957 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAGA AAGACGACGT TATACTCAGT ATCCCTGATC GCTGTACGCA GCCCTGGCAT 
GAAATGTTAC CCGCCGGAGA CGGCCGTTTT TGTCTGAGTT GTCAGAGGAA GGTGACTGAC
TTTACGGGAA TGACTGATGC GGAATTATTA GCTTCTCTGA AGTGGAACCA GGGGAATGGC
TGTGGTCGTT TTGATGCGAC GCAGTTGGAC AGGGTATTAC AAGCTCCGCA GGAGCCATCC
CGGTCAGTTT TTCCTGCTAT TTTGTTAAGT ACAATGCTGA CGGCTATATT ACCGGGGCAG
TTGCATGGGA ATTATAAAGT ACCTGCTGTT ACGATGGCGC CGTCTTTACA GGCGGGAGGG
GACAAACGTA TTCAGGGATG TATTATGGAT GATGGAGGGA ATGCTTTGGA TCAGGTATCT
GTGCGTATAA AAAATCATGC AGGTATCGGA TGTATCACAG ATGTAGAGGG CCAGTTTAGT
TTCACGCTGC CGGCAGCGCT GTTTACTACG GATTCAATTA CGCTTCAGAT CAGCCGTCTT
GGATATGATG CCCGGGAAGT GTTGCTTAGC GCGGACCAGT TTTCCAATGT ACAGGTTAGT
TTGAAGGCAT CTATGATGGC ACTGCCGGAA GTGGTCGTAC CGCATTATGG ATGGACTACA
GTAACCGTTG TTACCGGCGC ATACGCCAAT GTGAATGCTT GTAAAAACCC CCGCTGGCAT
TGGTGGCATA AACTGACCCG CGTGTTCCGG AAAAACAAAA ACACGTATTA A
 
Protein sequence
MKQKDDVILS IPDRCTQPWH EMLPAGDGRF CLSCQRKVTD FTGMTDAELL ASLKWNQGNG 
CGRFDATQLD RVLQAPQEPS RSVFPAILLS TMLTAILPGQ LHGNYKVPAV TMAPSLQAGG
DKRIQGCIMD DGGNALDQVS VRIKNHAGIG CITDVEGQFS FTLPAALFTT DSITLQISRL
GYDAREVLLS ADQFSNVQVS LKASMMALPE VVVPHYGWTT VTVVTGAYAN VNACKNPRWH
WWHKLTRVFR KNKNTY