Gene Cpin_1046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1046 
Symbol 
ID8357160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1253933 
End bp1254475 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content44% 
IMG OID644963200 
ProductColicin V production protein 
Protein accessionYP_003120745 
Protein GI256420092 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCATTG ACATAGTTTT TGCTATCCTG ATGGTATTAG CCATCTATAA GGGGTACAGC 
CGTGGGCTGA TCGTAGCCGT TTTCTCCTTT ATTGCGGTGA CCCTGGGATT GGCAGCCGCG
TTGAAATTAA CCACTGTAAC GGCCCTCTAT GCCCAGGAAC ACTGGAATAT TCACACCCGC
TGGCTACCCA TACTGTGTTT CATCGCGCTT TTTGTTGGCG TCGTATTTCT GGTGAGGTTT
GGCGCCACAC TTATTCAGGC CATGGTAGAG GCTGCAATGA TGGGATGGTT AAACAAATTA
GGTGGAATTA TATTATATAG TGCTATCTTT ATCACTGTTT ATAGCATCCT ATTGTGGATT
GCCAATCAGA TGTATTGGTT AAGCCCGGAA TTAAAGATGC AATCTGTAGT ATACCCCTAC
ATTGAGCCTC TTGGTCCGGT TGTGATGAAT GTATGGGGCA AAATTGTTCC CATCTTCAGG
GATATGTTCG AAAATCTTCA GTCATTTTTT GACAACGCGG CGAAGGAAAT ACAAGCTACT
TAG
 
Protein sequence
MGIDIVFAIL MVLAIYKGYS RGLIVAVFSF IAVTLGLAAA LKLTTVTALY AQEHWNIHTR 
WLPILCFIAL FVGVVFLVRF GATLIQAMVE AAMMGWLNKL GGIILYSAIF ITVYSILLWI
ANQMYWLSPE LKMQSVVYPY IEPLGPVVMN VWGKIVPIFR DMFENLQSFF DNAAKEIQAT