Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1039 |
Symbol | |
ID | 8357153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 1247984 |
End bp | 1248787 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644963193 |
Product | alpha/beta hydrolase fold protein |
Protein accession | YP_003120738 |
Protein GI | 256420085 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGTCCT TTTTCCTGCC ATATCTGAAA AGCCGTTTTC ATACCATTCG TGATGGAACA GGAGAGGAAT TGCTGATATG TTTGCATGGT TTTGGAGAGA ATGCGGAGAG TTTCAGCCGT TTACATTATA CCCTGGGAGG GTATTTTACG ATTGTGTCAC TGGACCTTCC ACTGCATGGA AAAACGGAGT GGCTGGAAGA GCGGCCATTT TCTATGGATG ATCTGAAAGC AGTAATATTA CTCATTCTGC AACATTACCG CTTTAAGACC TTTTCCCTGA TGGGGTATAG TATGGGAGGA CGGGTAGCCC TCTGCGTTGT GCAATTACTG GCTGAAAGGA TTGACCGGCT TTACCTGCTG GCGCCCGACG GGCTTAAAGA TAACCGCTGG CATATGTTTG CCACACAAAC CAATATGGGC AACAAGCTGT TTAAGCACTG TACCTATCAT CCACAGTTAT TTTTCGGTTT GCTGCGCACC TGGCGTTCCT TACGTTTTAT CAGTCGGGGA CTGCATAAAT TCACGTTCAA CAGTATGAAT ACGCTGGAAA AGCGGGAGAG GGTGTATTTT GTGTGGACAT GTATGGGACA GATGATGCCG GACCGGGAAT TGTGTAAACA GCAACTGAAA AAATACCGTA TCAGCACATT GTTGCTTTTC GGGAAGTATG ACCGCGTTAT TCCTCCCATA TTGGGTGTAC GGTTTATGGA TGGCACATTC CCCTGTGAGA TGCAGGTGCT GGAAAGAGGA CACCAGCTGA TCAGTGAAGA TGCCGCGGAA GTGATCCGGG CATATAGTTT TTAA
|
Protein sequence | MSSFFLPYLK SRFHTIRDGT GEELLICLHG FGENAESFSR LHYTLGGYFT IVSLDLPLHG KTEWLEERPF SMDDLKAVIL LILQHYRFKT FSLMGYSMGG RVALCVVQLL AERIDRLYLL APDGLKDNRW HMFATQTNMG NKLFKHCTYH PQLFFGLLRT WRSLRFISRG LHKFTFNSMN TLEKRERVYF VWTCMGQMMP DRELCKQQLK KYRISTLLLF GKYDRVIPPI LGVRFMDGTF PCEMQVLERG HQLISEDAAE VIRAYSF
|
| |