| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1037 |
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| Symbol | |
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| ID | 8357151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 1244297 |
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| End bp | 1246033 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644963191 |
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| Product | cell wall hydrolase/autolysin |
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| Protein accession | YP_003120736 |
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| Protein GI | 256420083 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGAGAT TCGCATTACT ACTACTGTTA CAAACAGCAT ACACAGGTCT GCAATTACAT
GCACAGGCGT TCCTGAAAAT GGCGCAGCCA CTCAGGACAG AAATTAATAC CGGCAGCTCA
AAGCAATACT GGTCAGGACG CACCTGCGTA GGCTGTAAGG TACTGCTCAA CAACGACAGC
ATTCACGTAT ACCCCAATGG CGTCTTCGCG ATCAAACGTG AAGCAAAACC AGGGAGAAAT
ACCTACGTGC TCTCCTCCAC CGACAGCACC GGCAAATTCG TTTCCCGCAC CTACAACATC
TATTTCACGA CACTTCCGCC AGCAAGGGTA ACGCCCTCCT TCCGGATCGA TAACGTTACC
ATCTCTCCTA AGACCAATAC CACGCTTTCC GCAGGGGATA CCTTACGGGT ACGCATGAAA
GGCTATCCAG ACGGTCAGGC CAGCTGGTTC AACGGCGCTC CCATCGCGGA ACTGCCGGCT
GCACAATCAG GTGGTATCCC TGGCTATTAT GCCGGCTACC ATGTCATGAC GGAAGCTGAC
TCCATGCTGG ACGGAAAGAT CAACGTATCA CTGAAATACA AAGGACAGAC AGCCGTATTA
CCTGGTAGTT TCCGTTATAC CTATCTGCGT AATACCGAAC TATATGCACG CACCATCGAT
GATCAGTGCT ACCTGACCAT CACGCCCGAC GGCGACCGCC TCGGACCTGA AAAAATGGGC
TACCTGGACA GAAATGTCCT GTTACATATC TCCGGCAGAG AAGGCAGCCA TTACCGCGTA
AAACTGAGTA AGTATCAGTA TGCATATATT CCTGAAGGAC TCGTAGATAC GATGACATTG
ACAGAACCTG TACCGCAGAG TATTGTCAAT GAAGCAAGGG TATGGAGTGA TAAACAGTTT
GACTATATCT CCATCGGACT GGCAGATAAA CTCCCCTACC TTTCCACACA GGAGGTCAAC
CCGGGGAAAG TAATCGTAGA TATACACGGC GTCGTATCAG AACCAGGCTT CCTCCCTTCT
TCTGAAGGTA CCGGAGAGAT CAGCCGGATA GACTGGAAGC AGATAAATCC GGAGGTATTC
CGGATCAACA TTTCCCTGGC CCATAAACAG CCCTGGGGAT ATAAGATCTT TTATGCCGAC
AGCAATCGCC TGACCATCCG CATCAAACAT CAGCCAGCTG ACCTGCAGTT AAAAAATCTG
ACTATCGGCC TCGACGCAGG TCACGGTGGA GGCAATGTCG GTACTGCCGG TGCAATGGGT
ATTGCTGAAA AACAACTGGC ACTGAACCTT ACCCTGCTGG TAAAAGCCGC CCTGGAAAAA
GAAGGCGCTA AAGTCATTAC TACACGCATG AGCGATGTAT TTGTAGACAA CCAGGCGAGA
TTATACAATT ACCGTCAACT CGCGCCGGAT CTGCTGCTGA GCATTCATAT GAACTCCTCT
GTCAATCCGG TAGATGTAAA AGGAACAGCG AATTACTATA AATACCCCTT CTGTGAACCA
TTGAACCGGT ACTTACATAA CCGGCTGCTG GAAACGGGCT TGGCTGACTT TAAGAATAAT
GCTAACTTCA ATTTCATTCT AAACATGCCT ACAGAAATGC CCTCGGCATT GATAGAGACC
CTGTTCCTGA GCTATCCGGA AGATGAAATC CGCATCCTGG ATGAAAACTT CCGCTTGGTG
TTAACAGAAA AGATCGTACA GGGACTGAAG GATTTTCTGC AGGATGCAGG TAAATAA
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| Protein sequence | MRRFALLLLL QTAYTGLQLH AQAFLKMAQP LRTEINTGSS KQYWSGRTCV GCKVLLNNDS
IHVYPNGVFA IKREAKPGRN TYVLSSTDST GKFVSRTYNI YFTTLPPARV TPSFRIDNVT
ISPKTNTTLS AGDTLRVRMK GYPDGQASWF NGAPIAELPA AQSGGIPGYY AGYHVMTEAD
SMLDGKINVS LKYKGQTAVL PGSFRYTYLR NTELYARTID DQCYLTITPD GDRLGPEKMG
YLDRNVLLHI SGREGSHYRV KLSKYQYAYI PEGLVDTMTL TEPVPQSIVN EARVWSDKQF
DYISIGLADK LPYLSTQEVN PGKVIVDIHG VVSEPGFLPS SEGTGEISRI DWKQINPEVF
RINISLAHKQ PWGYKIFYAD SNRLTIRIKH QPADLQLKNL TIGLDAGHGG GNVGTAGAMG
IAEKQLALNL TLLVKAALEK EGAKVITTRM SDVFVDNQAR LYNYRQLAPD LLLSIHMNSS
VNPVDVKGTA NYYKYPFCEP LNRYLHNRLL ETGLADFKNN ANFNFILNMP TEMPSALIET
LFLSYPEDEI RILDENFRLV LTEKIVQGLK DFLQDAGK
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