Gene Cpin_1035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1035 
Symbol 
ID8357149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1242822 
End bp1243874 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content45% 
IMG OID644963189 
Product3-phytase 
Protein accessionYP_003120734 
Protein GI256420081 
COG category[I] Lipid transport and metabolism 
COG ID[COG4247] 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAAGA ATATATTGGC GCCTTTAAGC GGTCTCGTAA TATTTGGCGC CTGCCAGGTG 
AATTCAGCAA AAACTGTTGT AAGACAGGAT GGTATCAAGC CGGTAGTGGT TACACAGGAA
ACAGGCCATG ATACAGACGA TCCTGCCATC TGGATCAATA AAGCAGATAC ATTGAAAAGC
CTCATCATCG GCACCGATAA GAATAGTGAT GGAGGATTGT ATGCCTTTGA TCTTGAGGGG
AAAATTGTCA ACAAGGTATT GGGTTTAAAA CGCCCGAACA ATGTGGACAT CGCTTACGGC
TTCAAATTGA ATGGTCAGCC GGTGGATATT GCCGTACTGA CAGAACGTGA AACAAATACG
ATCCGCATAT TTCGTCTGCC TGAGCTGACG CCGGTTGATG GTGGTGGTAT ACCGGTATTC
GAGGGGGAAA AAGAACGCGC TCCGATGGGA GTAGCGATGT ACACCCGTCC GGAAGATGCC
GCTATTTTCG CCATTGTCGG CCGCAAGAGT GGTCCTGCTG AAGGATATCT CTGGCAATAC
CGCCTTGTGG ATGAAAACGG GGTAGTAAAG GGCCGCCTGG TACGAAAATT CGGCGCTTAC
AGCGGTAAAA AAGAGATAGA ATCTATTGCG GTGGATAACA AGCTGGGATA CGTTTATTAT
TCTGATGAAA CGGTTGGCGT ACGTAAGTAT TTAGCTGATC CGGCGAAATG GGAGAATAAG
GAACTGGCAT TGTTTGCCAA AGAAGGATTT GTTTCTGATC ATGAGGGTAT TTCCATTTAC
CCGACATCTG ATTCGACAGG ATATTTATTG GTATCCAATC AGCAGAATAA TTCATTCATG
ATTTACAGAA GAGAGGGTGA AAATGGAGCA GCGAATGAAC ATAAACTAAT GGCAGAGGTA
CCGGTATCTA CACTGGAGAG CGATGGTTCA GAAGTGACGG CTGTTCCGCT GGGAAGTAAA
TTCCCGAAGG GAATGTTTGT CGCCATGAGC AATGGAAGAG TATTCCATTA TTATTCCTGG
GAAGATATAC AAGCGAAGAT CAAAGAAAAA TAG
 
Protein sequence
MLKNILAPLS GLVIFGACQV NSAKTVVRQD GIKPVVVTQE TGHDTDDPAI WINKADTLKS 
LIIGTDKNSD GGLYAFDLEG KIVNKVLGLK RPNNVDIAYG FKLNGQPVDI AVLTERETNT
IRIFRLPELT PVDGGGIPVF EGEKERAPMG VAMYTRPEDA AIFAIVGRKS GPAEGYLWQY
RLVDENGVVK GRLVRKFGAY SGKKEIESIA VDNKLGYVYY SDETVGVRKY LADPAKWENK
ELALFAKEGF VSDHEGISIY PTSDSTGYLL VSNQQNNSFM IYRREGENGA ANEHKLMAEV
PVSTLESDGS EVTAVPLGSK FPKGMFVAMS NGRVFHYYSW EDIQAKIKEK