Gene Cpin_1023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1023 
Symbol 
ID8357137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1227223 
End bp1228017 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content47% 
IMG OID644963177 
ProductNitrilase/cyanide hydratase and apolipoprotein N- acyltransferase 
Protein accessionYP_003120722 
Protein GI256420069 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGATC TGAAAGTAAC GCTCATACAG ACTAACCTGA ACTGGGAAAA TATTGACGAG 
AATCTTCGCA TGTTCGACGA AAAGGTCGAT TCGATCAAGG AAAGAACCGA AGTAGTGGTG
CTGCCGGAAA TGTTCAGCAC GGGCTTTAGT ATGGCGCCTG AAAGACTGGC ACAAAAAATG
GACGGTTCTG CTGTGCAATG GATGAAGAAG AAGGCTGCCG AAAAGAACAT TATTCTGACC
GGAAGTCTGA TCATTGAAGA GGATGGCCAA TACTGGAACC GCCTGATCTG GATGCAGCCT
AACGGTGTTT TCGGTACTTA CAATAAACGT CACCTGTTTG GTTTCGGTGG TGAGCATGAG
CACTACCAGG CGGGCGATAA ACGCCTGATC GCCTCCGTAA AAGGATGGAA AGTGTGCCTG
ACGGTATGTT ATGACCTGCG TTTCCCCGTG TGGTCCAGGA ATGCGATTTC ACCTGAAACC
GGCGAACCTG CATACGATGT GCTGATCAAT GTGGCTAACT GGCCTGAGCG CAGAAGTACG
CCATGGAAAG CACTGATCCA TGCACGTGCT ATTGAAAATC AATGTTATAC GATTGGTGTG
AACAGGGTAG GTAACGACGG TAATAACATC TATCACAGTG GTGATTCCAG CCTGATCGAC
CCACTGGGTG AGATCATCTA TCAGAAATCA CACGATGAGG ATATCTTTAC CACTACACTT
GAACGCTCCC GCCTGGAAGA AGTGAGAAGT AAATTTCCTT TCCTGAAGGA TGCAGATAAA
TTCCAGGTTT TTTAA
 
Protein sequence
MSDLKVTLIQ TNLNWENIDE NLRMFDEKVD SIKERTEVVV LPEMFSTGFS MAPERLAQKM 
DGSAVQWMKK KAAEKNIILT GSLIIEEDGQ YWNRLIWMQP NGVFGTYNKR HLFGFGGEHE
HYQAGDKRLI ASVKGWKVCL TVCYDLRFPV WSRNAISPET GEPAYDVLIN VANWPERRST
PWKALIHARA IENQCYTIGV NRVGNDGNNI YHSGDSSLID PLGEIIYQKS HDEDIFTTTL
ERSRLEEVRS KFPFLKDADK FQVF