| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0959 |
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| Symbol | |
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| ID | 8357073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1147700 |
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| End bp | 1150042 |
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| Gene Length | 2343 bp |
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| Protein Length | 780 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644963113 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003120658 |
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| Protein GI | 256420005 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000592859 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.743211 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAAAGA GTTATATAAA AATAGCCTGG AGGAATTTGT GGCGGAACCG CACATTTTCC
GCGATCAATA TAGCCGGTCT GACCGTTGGT ATGGCCGTGA GTTTTACGTT ATTACTGTAT
GTACTGTTTC AATTCAGCTA TGACAGGTTT CATGAACATG GCAAAGATAT TTATCATCTT
AAACTAGGAG CAGAAGGCGG GTCTAATACC CCTGTGCCGC TGGGACCATT TGTGGAGAAG
AATATACCTG AAGTGAAGGC GGTTGTGCGG ACTACCTATC TCACGCCGCA TTTATTGAAG
GTCGGAGATA AGTCTGTCAA GCAGCAGGGT ATTTTTACTG ATCCCGGTTT CCTGAACGTA
TTTACTTTCC CGCTGTTGCG TGGACAGGGT ACATTGAAAG ATGAAAATGT GATCGTGCTT
ACGGAAAGTA CTGCCCGTAA ATTGTTTGGC GACGCCGATC CGATCGGGCA GATCGTCAAT
TTTGATATCA CACATCCGCT TGTTGTACAG GGTGTTGTAA AAGATCCTCC TAAGAACTCC
ACGGTACGTT TTGCGTATCT GTTAAGCTGG AAGCTGTGTT TACAGATCAT GCCATGGGTA
GGTGAAGAAG AATGGGGAAA CTTCGGGCTC AATACCTATG TGCAGTTAAA TCCGGCAGCT
GACCCGCAGG TAGCAGGACG TAAAGTGAGG AATCTCCTGC ATGAGCAATC CGGGGGAATA
CCTGAGACGA CCTATCTCAT CATGCATCCG ATGAGTAAAT GGAAATTATA TTCAGAGATA
AAAGATGGTA AAATAATCGG TGGCGAGATC AGTTCTGTAC GTCTGTTTGC ACTGCTGGCA
TTGGGCATTT TGCTGATTGC CTGTGTGAAT TTCATGAATC TCAGTACGGC GCAGAGTGAA
AGAAGAGCCA AAGAAGTGGG TGTCAGGAAA GCGATTGGTG CTAATAAGCG TACCCTGATC
GGACAGTTTA TGTACGAGTC CATGATGTTG GTGTTTATCT CTTTAGTGCT GGCGTTGGTA
TTAATGTGGA TCATACTGCC CCGCTTTAAT GCATTAACAG ATAGTTCGCT GCAATTATCA
CTGGCGCCGG CTTATTTCTG GTTGGCGATA CTGGTACTGG CTGTTTTAAC CGGTTTTGTG
GCGGGTAGCT ACCCGGCTTT TGTACTGTCT TCTTTCAAAC CTATTAAGGT GTTAAAGGGC
GGACTGGTAG AAATAAAAGG CAGTTTCAAG TCAAGACAGA CGCTGGTGGT ATTTCAGTTT
ACGCTGGCTA TTGTGTTGAT ACTGGTGACG ATCGTTATTT ACAGGCAGAT AGATTTTATC
CGCAGCCGTC CCCTGGGATA TGATACGAAG GGATTGGTAG ATGTGGAGCT GGAGGGGAAG
GTATATGATA ATTATGATGC TTTCAGACAG GAGGCAATTG CATCAGGCGC TGCAGTTAAT
GGCAGTATCA TGATGAGTTC TATTGCACAG ACAGGCGGTA GTGTATGGGG ATTGAGATGG
CCGGGACAAT TGCCTGGTGA AGAGAATACA AACTTTGGTA TTATCACCGC TACAGAGAAC
TTCATTTCCA CTTTCGGCAT ACAGTTAAAA GAAGGACGTG ATTTTCAGTC AGCGGCAGAT
TCCCTGTCGA TTATACTGAA TGAAGCTGCT GTAAAGACGA TGCATCTGAA AGATCCTGTA
CTTGGGCAGC AGATCGTGTT AAACGGTGAG CAGAGAACGA TCACCGGAAT TGTAAAGGAT
TTTGTGTGGA TGAAATCTTA CATGCCGGCT ACACCTGCGG TGATACCTTA TAATCCTTCC
TGGAGAGGTA TGCTGACAAT TAAGCTGAAT CCGGCTTTGT CAGTTGGCGA AGGGCTGGCT
CGTCTGGAGA AAGTATATCA CAGGCTCAAC CCTGATTATC CGTTTGCATA TTCTTTTGTG
GATGCGACTT ATGAAGAGAA GTATGCGTAT GAGAAATTGC TGGGTATTAT GATCAATGTT
TTTGCCACAC TGGCGATTGT GATCAGTTGC ATGGGCTTGC TGGGATTGTC TGTTTTTGCG
GCAGCCCGCA GGAGGAAGGA GATCGGTATC CGTAAAGTAA TGGGGGCGGG CGTTGCGCAG
GTAACGGTGC TGTTATCCAG GGATTTCCTG AAGCCTGTGT TGATAGCGAT TGTGATTGCT
TCACCGGTGG CCTCTTATAT TATGATAAGG TGGTTGCAGC AGTATACCTA TCGTATTTCG
CTGGAGTGGT GGATGTATGT GCTGGCGGGT TTTACGGCGG TTGCGATCGC ATTGATGACG
GTTAGTATAC AGTCAGTCCG GGCAGCATTG ATGAACCCTG TAAAGGCGTT ACGTTCGGAA
TAG
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| Protein sequence | MVKSYIKIAW RNLWRNRTFS AINIAGLTVG MAVSFTLLLY VLFQFSYDRF HEHGKDIYHL
KLGAEGGSNT PVPLGPFVEK NIPEVKAVVR TTYLTPHLLK VGDKSVKQQG IFTDPGFLNV
FTFPLLRGQG TLKDENVIVL TESTARKLFG DADPIGQIVN FDITHPLVVQ GVVKDPPKNS
TVRFAYLLSW KLCLQIMPWV GEEEWGNFGL NTYVQLNPAA DPQVAGRKVR NLLHEQSGGI
PETTYLIMHP MSKWKLYSEI KDGKIIGGEI SSVRLFALLA LGILLIACVN FMNLSTAQSE
RRAKEVGVRK AIGANKRTLI GQFMYESMML VFISLVLALV LMWIILPRFN ALTDSSLQLS
LAPAYFWLAI LVLAVLTGFV AGSYPAFVLS SFKPIKVLKG GLVEIKGSFK SRQTLVVFQF
TLAIVLILVT IVIYRQIDFI RSRPLGYDTK GLVDVELEGK VYDNYDAFRQ EAIASGAAVN
GSIMMSSIAQ TGGSVWGLRW PGQLPGEENT NFGIITATEN FISTFGIQLK EGRDFQSAAD
SLSIILNEAA VKTMHLKDPV LGQQIVLNGE QRTITGIVKD FVWMKSYMPA TPAVIPYNPS
WRGMLTIKLN PALSVGEGLA RLEKVYHRLN PDYPFAYSFV DATYEEKYAY EKLLGIMINV
FATLAIVISC MGLLGLSVFA AARRRKEIGI RKVMGAGVAQ VTVLLSRDFL KPVLIAIVIA
SPVASYIMIR WLQQYTYRIS LEWWMYVLAG FTAVAIALMT VSIQSVRAAL MNPVKALRSE
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