Gene Cpin_0948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0948 
Symbol 
ID8357062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1131656 
End bp1131988 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content48% 
IMG OID644963102 
Producttransport-associated 
Protein accessionYP_003120647 
Protein GI256419994 
COG category[R] General function prediction only 
COG ID[COG2823] Predicted periplasmic or secreted lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATGTA AAACTTTCCT GATGGCTGGA ATGATGTTCC TTGCCGTATG CTTATTTGCC 
TGTTCGCCCA GTGATAGCAG CGTTCAGCAA TCCGTTAATG AGAAACTCAC TGCTTCCCCA
GGCGTTACTG CCGAAGTAAA GGAAGGAGTT GTTACCCTGA ATGGTGAAGT AGCTGACGAT
GCCGCAAAAA CAGCTGCAGA AGATGCAGTG AAAGGCGTCA GCGGTGTGAA ATCTGTGACT
AACAACATTA TGGTGCAGGC AGCAGTTCCT CCACCACCCC CACCAGCAGC TCCTGATTCT
ACGATGAAAA CAGACAGTGC TGCTATGAAA TAG
 
Protein sequence
MKCKTFLMAG MMFLAVCLFA CSPSDSSVQQ SVNEKLTASP GVTAEVKEGV VTLNGEVADD 
AAKTAAEDAV KGVSGVKSVT NNIMVQAAVP PPPPPAAPDS TMKTDSAAMK