Gene Cpin_0916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0916 
Symbol 
ID8357030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1091989 
End bp1093620 
Gene Length1632 bp 
Protein Length543 aa 
Translation table11 
GC content45% 
IMG OID644963070 
Producthypothetical protein 
Protein accessionYP_003120615 
Protein GI256419962 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.122138 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TCCTCATTCC CGTACTGTTA TGCAGCCTGT GGGCCTGTAA AAAAGATGAA 
AAGCCACAGC CAGAACCTCC TGCCGAAATT CCAGACCTGA TCGTTACGGT ATGGGATGCC
ACCAGATGGG ATCTATTCCA TACAAAGGGA CTACCAACTG CCGATGCGAA AGTGCAATTG
TTTACATCAA AAAAAGATTT TCTCGACGGC AGACCTACAT ATACTGCCAC CGCTGACCAA
TCGGGCAAAG CACTGTTTGA AAATGTCACT CCCGGCAAAT ATTTTATACT GGCATTCAAA
CAGGATATGC TCAATATCTG GACTGATGCC AATGGCAATA CAATGGTATC AGACACCCTG
TTCCAGTCTG AAACAGAAAT TAAAAATCCG CAAACGCCAC TCCAGTCAGA AGCAATGCCT
GGCGACTTCC GTTTCAAAGA CCTGAATGGA GACATGATCA TCAACGCTTC AGATGTTGCA
GAAGTAACAT CCCTCAGCTA CGATATTAAG AAAGACGGCA TCACCACAGT AGATGTCATG
ATCGGTTACA AATCCAATTC AAAAGCGGAT CTTTTTAAAA CGACAGACGA GGTAGAAACG
CAACTGAATA CTTTCATCTC CAACCTGGGC GTAGGACATA ATCGCCTGGC GATACTGGAC
GGAGTACTCA GCGATGATGC GGATTGTAGT ATCATCACTT ACTGGTGTGA TTACGACAAA
TTTACCTTTA ACGCATCAAC TGAAGGCGCA ACCAATATCT TTAATAGTTA CTTGGGCAGT
ATACTGTGGC TGAATAAGAT GCTTTTAAGT CTGCAACAGA TCAATGGCGA CCATTCCGTG
CTGACAGCAC AGATCAGGGC ATACCGCGCC TTTATCTACC TGGAGTTACA AACGTATTTT
GGACAGCTCC CTATTATCAA AAATGAGAAA ATAGGCTTCG TCGATCTTAA ACGTGCTAGC
TGGGAAGAAA CCAGGTCATT TATAAAAACA GAACTGAAAG CCGCACTTCC TGCATTGCCG
GCAATACCGC CTGCTAACAC GACAGGACGC GTCACCAGCT ATGCGGCTCA CATGCTGCTG
GCCAGGTTAG CGTTCCAGGA AAGCGACGTA GAAACACTCA TTGCTGAAAC CGATGCAGTA
ATCGATTCAA AAGCATATGA ACTGGTTGAC TACAGTACGG TGTTTACGAA TCCCTCCAAT
CATGAAATCA TCTGGACCCT GCCCTTGTCT AGTGCAGGGG AAAGTACCTT CACCAGCTAC
TTTGTACGTA ACAATATACC CTTCAAATTT TTTCCGGTTA TCCGCTACAC GGAAACATGG
TTACTGAGAG CCTATGGTAA AGCGATGTCC AACGATCTCT CTGGTACCAA AGATGCTATC
AACACCATCC GCGCACGCAG TAATAAACCA GTAGCCAATC CAAAAAATAT GGATGAGGCA
ATTGCAGAAT TGGGATCGCT TTATAAGGAT GAATTGTATC GCGAAGGTTT CCGCTACGCA
TTCCTGGTAT TGACCAATCA GGCCAAACAG GTGCTGGCTG ATAAAGGTTA CAAAGACCAT
CACATGTACC TGCCTATTCC AAGTACGGCC ATCAGTATGT ATCCAAACAT GACGCAGAAC
GCAGGTTACT AA
 
Protein sequence
MKKILIPVLL CSLWACKKDE KPQPEPPAEI PDLIVTVWDA TRWDLFHTKG LPTADAKVQL 
FTSKKDFLDG RPTYTATADQ SGKALFENVT PGKYFILAFK QDMLNIWTDA NGNTMVSDTL
FQSETEIKNP QTPLQSEAMP GDFRFKDLNG DMIINASDVA EVTSLSYDIK KDGITTVDVM
IGYKSNSKAD LFKTTDEVET QLNTFISNLG VGHNRLAILD GVLSDDADCS IITYWCDYDK
FTFNASTEGA TNIFNSYLGS ILWLNKMLLS LQQINGDHSV LTAQIRAYRA FIYLELQTYF
GQLPIIKNEK IGFVDLKRAS WEETRSFIKT ELKAALPALP AIPPANTTGR VTSYAAHMLL
ARLAFQESDV ETLIAETDAV IDSKAYELVD YSTVFTNPSN HEIIWTLPLS SAGESTFTSY
FVRNNIPFKF FPVIRYTETW LLRAYGKAMS NDLSGTKDAI NTIRARSNKP VANPKNMDEA
IAELGSLYKD ELYREGFRYA FLVLTNQAKQ VLADKGYKDH HMYLPIPSTA ISMYPNMTQN
AGY