Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0916 |
Symbol | |
ID | 8357030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 1091989 |
End bp | 1093620 |
Gene Length | 1632 bp |
Protein Length | 543 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644963070 |
Product | hypothetical protein |
Protein accession | YP_003120615 |
Protein GI | 256419962 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.122138 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAAAA TCCTCATTCC CGTACTGTTA TGCAGCCTGT GGGCCTGTAA AAAAGATGAA AAGCCACAGC CAGAACCTCC TGCCGAAATT CCAGACCTGA TCGTTACGGT ATGGGATGCC ACCAGATGGG ATCTATTCCA TACAAAGGGA CTACCAACTG CCGATGCGAA AGTGCAATTG TTTACATCAA AAAAAGATTT TCTCGACGGC AGACCTACAT ATACTGCCAC CGCTGACCAA TCGGGCAAAG CACTGTTTGA AAATGTCACT CCCGGCAAAT ATTTTATACT GGCATTCAAA CAGGATATGC TCAATATCTG GACTGATGCC AATGGCAATA CAATGGTATC AGACACCCTG TTCCAGTCTG AAACAGAAAT TAAAAATCCG CAAACGCCAC TCCAGTCAGA AGCAATGCCT GGCGACTTCC GTTTCAAAGA CCTGAATGGA GACATGATCA TCAACGCTTC AGATGTTGCA GAAGTAACAT CCCTCAGCTA CGATATTAAG AAAGACGGCA TCACCACAGT AGATGTCATG ATCGGTTACA AATCCAATTC AAAAGCGGAT CTTTTTAAAA CGACAGACGA GGTAGAAACG CAACTGAATA CTTTCATCTC CAACCTGGGC GTAGGACATA ATCGCCTGGC GATACTGGAC GGAGTACTCA GCGATGATGC GGATTGTAGT ATCATCACTT ACTGGTGTGA TTACGACAAA TTTACCTTTA ACGCATCAAC TGAAGGCGCA ACCAATATCT TTAATAGTTA CTTGGGCAGT ATACTGTGGC TGAATAAGAT GCTTTTAAGT CTGCAACAGA TCAATGGCGA CCATTCCGTG CTGACAGCAC AGATCAGGGC ATACCGCGCC TTTATCTACC TGGAGTTACA AACGTATTTT GGACAGCTCC CTATTATCAA AAATGAGAAA ATAGGCTTCG TCGATCTTAA ACGTGCTAGC TGGGAAGAAA CCAGGTCATT TATAAAAACA GAACTGAAAG CCGCACTTCC TGCATTGCCG GCAATACCGC CTGCTAACAC GACAGGACGC GTCACCAGCT ATGCGGCTCA CATGCTGCTG GCCAGGTTAG CGTTCCAGGA AAGCGACGTA GAAACACTCA TTGCTGAAAC CGATGCAGTA ATCGATTCAA AAGCATATGA ACTGGTTGAC TACAGTACGG TGTTTACGAA TCCCTCCAAT CATGAAATCA TCTGGACCCT GCCCTTGTCT AGTGCAGGGG AAAGTACCTT CACCAGCTAC TTTGTACGTA ACAATATACC CTTCAAATTT TTTCCGGTTA TCCGCTACAC GGAAACATGG TTACTGAGAG CCTATGGTAA AGCGATGTCC AACGATCTCT CTGGTACCAA AGATGCTATC AACACCATCC GCGCACGCAG TAATAAACCA GTAGCCAATC CAAAAAATAT GGATGAGGCA ATTGCAGAAT TGGGATCGCT TTATAAGGAT GAATTGTATC GCGAAGGTTT CCGCTACGCA TTCCTGGTAT TGACCAATCA GGCCAAACAG GTGCTGGCTG ATAAAGGTTA CAAAGACCAT CACATGTACC TGCCTATTCC AAGTACGGCC ATCAGTATGT ATCCAAACAT GACGCAGAAC GCAGGTTACT AA
|
Protein sequence | MKKILIPVLL CSLWACKKDE KPQPEPPAEI PDLIVTVWDA TRWDLFHTKG LPTADAKVQL FTSKKDFLDG RPTYTATADQ SGKALFENVT PGKYFILAFK QDMLNIWTDA NGNTMVSDTL FQSETEIKNP QTPLQSEAMP GDFRFKDLNG DMIINASDVA EVTSLSYDIK KDGITTVDVM IGYKSNSKAD LFKTTDEVET QLNTFISNLG VGHNRLAILD GVLSDDADCS IITYWCDYDK FTFNASTEGA TNIFNSYLGS ILWLNKMLLS LQQINGDHSV LTAQIRAYRA FIYLELQTYF GQLPIIKNEK IGFVDLKRAS WEETRSFIKT ELKAALPALP AIPPANTTGR VTSYAAHMLL ARLAFQESDV ETLIAETDAV IDSKAYELVD YSTVFTNPSN HEIIWTLPLS SAGESTFTSY FVRNNIPFKF FPVIRYTETW LLRAYGKAMS NDLSGTKDAI NTIRARSNKP VANPKNMDEA IAELGSLYKD ELYREGFRYA FLVLTNQAKQ VLADKGYKDH HMYLPIPSTA ISMYPNMTQN AGY
|
| |