Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0866 |
Symbol | |
ID | 8356980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 1037540 |
End bp | 1038241 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644963020 |
Product | hypothetical protein |
Protein accession | YP_003120565 |
Protein GI | 256419912 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAAAA TTTTTACACT TATCTTTTTA GTGTTTCTTG CATTCCTATT TCCTGTACAC GCTCAGGTTA GTCTGGGGTT AAGAGGAGGC TATACTTTAT CCGCCACGCA GATCAAAAAT TCGCAAGGCT ATAAGAGTAA CAGTATCGGC ACCAGCAGCC AGCTAAAAAA TTTGCATGCA GACCTGATTA TCAATGTACC TGTGTACAAA AATCTTCATT TTCAGCCACT GGTAAGATAC ATTACCAAGG GCGCTTACCT CCGTCCGCTA CCTGATAAGT CAGGCTTACT GGTAGAATCA GCCAACCAGC TGAAACTGCA CTACCTGGAA GTTCCAATGA ATGTGGTATT TAAAATCCCC GTATCGATCG GCAAGATCGT TCTGGGAGCA GGCCCTTATG TAGCGTATGG CCTGGGCGGA TCTTATGACC TGGATCTGCT GTACAACGGA ACTGTACTGA GTACCGAATC ACATGATGTA AAATTCAATT ATAAAGACCG GGGCATTGCA CCAGGCGTTG AACTGAGCAG GTTTGATGCC GGCGCGAATG TGGCCCTTGG ATTTGAATTT AACAATCTGA TGGTATTGGG TGCTAGTCTC AGCAGGGGGT ATACTAATCT TGACCGGACT TCTTCCGCCA AGATTACCAA CAGCTATTTT TCTTTGAGTT TAGGTATTCT GCTCAACAGA GAAGATTATT AA
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Protein sequence | MSKIFTLIFL VFLAFLFPVH AQVSLGLRGG YTLSATQIKN SQGYKSNSIG TSSQLKNLHA DLIINVPVYK NLHFQPLVRY ITKGAYLRPL PDKSGLLVES ANQLKLHYLE VPMNVVFKIP VSIGKIVLGA GPYVAYGLGG SYDLDLLYNG TVLSTESHDV KFNYKDRGIA PGVELSRFDA GANVALGFEF NNLMVLGASL SRGYTNLDRT SSAKITNSYF SLSLGILLNR EDY
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