Gene Cpin_0853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0853 
Symbol 
ID8356967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1022650 
End bp1023342 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content47% 
IMG OID644963007 
Producthypothetical protein 
Protein accessionYP_003120552 
Protein GI256419899 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.704163 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAAG TAATTATACC CACAACTGAT AATTCCCGGC CGAATAAGCC GGCATTTTCA 
CCAGCATTAC GCGCAGCAGC GGAGGTTATT TCATATGCAT CCCATCCGCT TTTCCTGCCA
ACGCTGGTAA CGGCATTCGT TGTCAATGCC TTACCGGAAT ATTTTGTTCA GTTCAAAGAA
GGCAGCGTTC GCTTTGCCTT TGATGCATTG TATTTCAGAG TGGTATTTAC CACGCTTTTC
CTGCCCATTT TTGTGGTAAT GCTGTGTAAA GCGCTGGGTT TTGTCGAGTC TTTCCAGTTA
CGGGGACAAA AGGACCGTAT CATTCCATAT ATAGCCTGTA CTATTTTTTA CTTCTGGATC
TATTTTGCCT TCAAACGTGA AGGAGCAGCA CCACCTTTCT TCAATGCATT CTTCCTGGGA
ATCTTTATTG CCATTGTAAT GGGCATGGTC GCCAATACCT ACGTGAAGAT CAGTATGCAT
ACGATCGGCT GGGGCGGTGT GATCGGTTTT CTGCTGATGC TGATGATCGG TATGAACATG
AATATCAGTC TGGTACTGAT GGTGGCATTC CTGCTCGCCG GTATTGTAGC AACTGCCCGC
CTGATCCTTG GAGCACACAC GCCTGCAGAG ATCTATACCG GTTTCGGGAT GGGTGTCCTG
GCACAGCTGA TCGCCTATGC TATCGTAGGA TAA
 
Protein sequence
MEQVIIPTTD NSRPNKPAFS PALRAAAEVI SYASHPLFLP TLVTAFVVNA LPEYFVQFKE 
GSVRFAFDAL YFRVVFTTLF LPIFVVMLCK ALGFVESFQL RGQKDRIIPY IACTIFYFWI
YFAFKREGAA PPFFNAFFLG IFIAIVMGMV ANTYVKISMH TIGWGGVIGF LLMLMIGMNM
NISLVLMVAF LLAGIVATAR LILGAHTPAE IYTGFGMGVL AQLIAYAIVG