| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0808 |
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| Symbol | |
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| ID | 8356921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 969984 |
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| End bp | 971963 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644962961 |
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| Product | dehydrogenase E1 component |
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| Protein accession | YP_003120507 |
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| Protein GI | 256419854 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.222813 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACTTTG AACGTGCACA CATCAGTGAT GAGGAGCTGC TGAGTTTTTA CAGGCAACTA
CTGTACCCCC GCCTGGTAGA AGAAAAAATG CTTCTACTCC TGCGGCAGGG TAAGGTGACA
AAATGGTTTT CCGGCATAGG CCAGGAAGCG ATTGCCGTCG GCGCTACATT AGCGTTGGAT
ATGGATGAAT GGATACTTCC CCTGCATCGC AACCTGGGCG TATTCACCAC CCGGCAGATG
TCCCTCCAGC AGTTGTTTCA TCAATGGCAG GGTAGTCCGC TGGGCTTCAG CAAGGGACGC
GAACGCTCAT TTCATTTCGG CAGCCGCCAG CATCACATAT GTGGCATGAT CTCACACCTG
GGTCCTCAAC TCTCCATTGC GGACGGTATT GCTCTCGCAC ATAAACTTAA AAAGGAAAAT
AAAGTGGCCC TCGCTTTCAC TGGTGAAGGC GGTACCAGTG AAGGCGAGTT CCATGAAGCG
CTTAATGTGG CCGCTGTATG GGACCTCCCT GTTATCTTTC TTATAGAAAA TAATGGCTAT
GGCCTGAGCA CACCGGTAGA AGAACAATAC CGCTGTGAGC AACTCGTACA ACGCGCCGCA
GGTTATGGTA TGCGTGGTAT GCGTATCAAC GGTAATAACC TGCTGGAGGT CTACCACGCT
ATCAAAGAGG CCAAAAGACA TGCGCTGCAG GAACAGCAAC CCGTCCTGAT CGAGGCCATG
ACCTTCCGTA TGCGCGGTCA TGAAGAGGCC AGCGGGACAA AGTATGTTCC CCCTGCCCTA
TTGGAAGAAT GGGCCAAACA GGATCCTATC CTTCATTTTG AAGGCTTCCT CCAATACCTC
CGCCTCCTGG ACGATCATAA GATCAAAAAC ATCAGGGAAC AACTGAAGCA GGAAATAGAT
AACGATATCC ATGAGGCACT CTCTGCCACG TCTCCTGCCG TCAGTATTAC GGATGAACTG
AACGATATCT ATGCGCCGGC CCTTCCGGCC ATACCTCCTC CTGAAGATAC ACCTTCCCCG
CAAAAACGGT TTATAGATGC GATCTCAGAA GGATTGCACC AGGCAATGGA CCGCTATCCG
AACCTCGTCC TTATGGGACA GGACATCGCA GAATACGGTG GTGCTTTTAA AATTACAGAA
GGCTTCTCCA CCATATTTGG GAGAGAACGG GTGAGAAATA CCCCTCTTTG CGAAAGTGCC
ATCATTGGCG CCGGACTGGG ATTGTCTATC ATGGGCTTTA AGAGCATGAT AGAAATGCAG
TTTGCCGACT TCGTCAGCTG CGGCTTTAAC CAGATCGTCA ATAACCTGGC GAAGATACAT
TACCGCTGGG GCCAGACGGC AGATGTGGTG ATCCGGCTCC CGGCAGGTGC CGGCGTTGGC
GCCGGACCCT TCCACTCTCA GAGCAATGAG GCATGGTTCA CACATGTACC TGGTCTGAAA
GTGGTCTATC CCTCTACTCC GGCTGACGCA AAAGGACTGC TGCTGGCGGC TTTTGCCGAT
CCTAACCCGG TATTGTTCTT TGAACATAAA GCGCTCTACC GCAGTATCAG CGGACCGGTA
TCACTGGACT GGTACACAAT AGAAATCGGG AAAGCAAAAC TTATACGAAG CGGAGAAGAT
ATCAGCATCA TTACCTATGG TAGCGGTGTA CACTGGGCGC TGGAATATGC ACAGCAATAC
CCGGATATCT CTATGCACAT CCTGGACCTC CGCTCCTTAC TCCCGCTGGA CTATGAAGCG
ATCAGGGCCG CTGTGGAAGC CACGGGAAAA GTACTCGTCC TGCATGAAGA TACACTAACG
GGTGGAGTCG GGTCAGAAAT CAGTGCCTGG ATAGCGGAAC ACTGTTTTTC CCTGCTGGAT
GCTCCGGTAA TGCGTTGCGC AGGACTCGAT ACACCGGTGC CTTTTGCAGC TGAGCTGGAG
AAAAATTTCC TCGCGAAAAC GCGTATGCAT CAATGCATAC AGCAACTCAT GAATTATTAG
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| Protein sequence | MYFERAHISD EELLSFYRQL LYPRLVEEKM LLLLRQGKVT KWFSGIGQEA IAVGATLALD
MDEWILPLHR NLGVFTTRQM SLQQLFHQWQ GSPLGFSKGR ERSFHFGSRQ HHICGMISHL
GPQLSIADGI ALAHKLKKEN KVALAFTGEG GTSEGEFHEA LNVAAVWDLP VIFLIENNGY
GLSTPVEEQY RCEQLVQRAA GYGMRGMRIN GNNLLEVYHA IKEAKRHALQ EQQPVLIEAM
TFRMRGHEEA SGTKYVPPAL LEEWAKQDPI LHFEGFLQYL RLLDDHKIKN IREQLKQEID
NDIHEALSAT SPAVSITDEL NDIYAPALPA IPPPEDTPSP QKRFIDAISE GLHQAMDRYP
NLVLMGQDIA EYGGAFKITE GFSTIFGRER VRNTPLCESA IIGAGLGLSI MGFKSMIEMQ
FADFVSCGFN QIVNNLAKIH YRWGQTADVV IRLPAGAGVG AGPFHSQSNE AWFTHVPGLK
VVYPSTPADA KGLLLAAFAD PNPVLFFEHK ALYRSISGPV SLDWYTIEIG KAKLIRSGED
ISIITYGSGV HWALEYAQQY PDISMHILDL RSLLPLDYEA IRAAVEATGK VLVLHEDTLT
GGVGSEISAW IAEHCFSLLD APVMRCAGLD TPVPFAAELE KNFLAKTRMH QCIQQLMNY
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