| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0700 |
|---|
| Symbol | |
|---|
| ID | 8356812 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 842622 |
|---|
| End bp | 843263 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644962852 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003120399 |
|---|
| Protein GI | 256419746 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGT TAGGATTATT TTTTATGGCT ATAGGGCTGT TGTCAATGAC AGCCTGTACC
AGCACCAAAC TGACTTCGTC CTGGAAGACA CCGGATGCCC GGATACAGCA GGAGAATAAG
ATCATGGTGA TCGCGCTGGT ACCTGCGAAA GAACGCAGTC TGCGTATACT GATGGAGGAT
AACCTGGTGT CAGAACTGAA GAAGGAAGGC TATAATGCGG TTTCTGCATA TGCTACCTAC
GGGCCTGATG ACAATCTTAG TAAAGGAGAT GAAAAGGCGG CCCTGAAAAA ATTCCGCGGC
AGTGATGTGG ACCAGGTGAT GACGATCGCA ATGGTGGACA AATCCCGAGA GAGAACCTAT
GTGCCGGGTT ATGGCGCTTA TGGTCCTTAT GGTAATCCAT ACTATGGTGG TTTCTGGCCT
TATTACAGAG GTTGGTACGG ACGGATGTAC GATCCGGGAT ACACCCAGGT CAATACGAAA
TATCAATGGG ATACTAACCT GTATGACCTG AAAGAGAAGA AGTTATTGTA CAATGCACAG
TCTGCGTCAG TAGACCCTCC TACTGCTTAC CGGCAGGCTT ACCTGTTTGC AAAGCAGATC
GTGAAAGATA TGCAGAAGCA GCAGCTGATA GCAATGAAGT AG
|
|---|
| Protein sequence | MKKLGLFFMA IGLLSMTACT STKLTSSWKT PDARIQQENK IMVIALVPAK ERSLRILMED
NLVSELKKEG YNAVSAYATY GPDDNLSKGD EKAALKKFRG SDVDQVMTIA MVDKSRERTY
VPGYGAYGPY GNPYYGGFWP YYRGWYGRMY DPGYTQVNTK YQWDTNLYDL KEKKLLYNAQ
SASVDPPTAY RQAYLFAKQI VKDMQKQQLI AMK
|
|---|
| |