Gene Cpin_0674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0674 
Symbol 
ID8356786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp814936 
End bp815934 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content46% 
IMG OID644962826 
Producthistidine kinase 
Protein accessionYP_003120373 
Protein GI256419720 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.174761 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGAAG GGAGAGCAAT CTCCTTTATT TATCTTTTTG TGCTGGCATA TACCATTCTC 
GCACTGGTAT GGTGGGGGGT GCTGCTGTTT AATCAAAGCG AGCAGATCAC CCGGTTTGAG
ATACAAAACC TCGTTTTACG TACTGACAGT ATTGCACATC CTGTCGAATA TCACCAGGAA
CTGACGCGTA TACAGACGAC GGAAGAGAGA CGTTCTGTCA TGTTCTTTGG AGAAGGCCTT
ATTTTTCTGG CCATCATTTT ACTGGGTGGA TTCTTCGTTT ATCGTGCTAT CTGGAAGCAA
ATGCGCCTTT CCCAGCAGCA GCAGAACTTT ATGATGGCGG TAACGCACGA ACTGAAATCG
CCTATAGCCG CCGCCAAACT AAATCTTGAA ACACTTCGCA AACACAAGCT GGACGAAGAT
AAGCGACTAA AGCTACTGGA TAATACCATC CGGGAAACCA ACCGTCTGGA CCAGCTTTGT
AATAATATAT TGCTGGCTTC ACAAATGGAG TCACAGCGTT ACCAGTTGTT TCGTGAGGAC
ATGGACTTTT CTTCCCTGCT GGAAAACGGG GTGAAGGAAA TCCAGTCACG CATTTCGACA
CATACGATAC AGGCACATAT TTTGCCTGAT GTCTGGGTCA ACGGAGATAA ATTCATGCTG
CAGATCTTAC TGAGCAATCT CGTAGAAAAT GCCGTGAAAT ACGCCCCCCG GAATACCAGG
ATCGATGTGT GTCTGGAGGA ATGCAATAAC AACCTGTTAA AGCTGAAAGT TACGGATGAA
GGGCCAGGCA TACCGGCAGA TGAACGGGAA AGGATATTCC TCAAGTTTTA TCGTATAGGC
AATGAGAATA CGCGTAAGGC GAAGGGGTCC GGACTCGGGC TGTTTCTCAG CAGAAAAATC
GTACAGCAAC ATGGAGGAAC GATTGTCGTG AAAGATAATA TACCCGCAGG CGCCAGTTTT
GAGATATCCT GGCCGGTATA TTCCATTCAA AGAGTGTAA
 
Protein sequence
MQEGRAISFI YLFVLAYTIL ALVWWGVLLF NQSEQITRFE IQNLVLRTDS IAHPVEYHQE 
LTRIQTTEER RSVMFFGEGL IFLAIILLGG FFVYRAIWKQ MRLSQQQQNF MMAVTHELKS
PIAAAKLNLE TLRKHKLDED KRLKLLDNTI RETNRLDQLC NNILLASQME SQRYQLFRED
MDFSSLLENG VKEIQSRIST HTIQAHILPD VWVNGDKFML QILLSNLVEN AVKYAPRNTR
IDVCLEECNN NLLKLKVTDE GPGIPADERE RIFLKFYRIG NENTRKAKGS GLGLFLSRKI
VQQHGGTIVV KDNIPAGASF EISWPVYSIQ RV