Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0674 |
Symbol | |
ID | 8356786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 814936 |
End bp | 815934 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644962826 |
Product | histidine kinase |
Protein accession | YP_003120373 |
Protein GI | 256419720 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.174761 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGAAG GGAGAGCAAT CTCCTTTATT TATCTTTTTG TGCTGGCATA TACCATTCTC GCACTGGTAT GGTGGGGGGT GCTGCTGTTT AATCAAAGCG AGCAGATCAC CCGGTTTGAG ATACAAAACC TCGTTTTACG TACTGACAGT ATTGCACATC CTGTCGAATA TCACCAGGAA CTGACGCGTA TACAGACGAC GGAAGAGAGA CGTTCTGTCA TGTTCTTTGG AGAAGGCCTT ATTTTTCTGG CCATCATTTT ACTGGGTGGA TTCTTCGTTT ATCGTGCTAT CTGGAAGCAA ATGCGCCTTT CCCAGCAGCA GCAGAACTTT ATGATGGCGG TAACGCACGA ACTGAAATCG CCTATAGCCG CCGCCAAACT AAATCTTGAA ACACTTCGCA AACACAAGCT GGACGAAGAT AAGCGACTAA AGCTACTGGA TAATACCATC CGGGAAACCA ACCGTCTGGA CCAGCTTTGT AATAATATAT TGCTGGCTTC ACAAATGGAG TCACAGCGTT ACCAGTTGTT TCGTGAGGAC ATGGACTTTT CTTCCCTGCT GGAAAACGGG GTGAAGGAAA TCCAGTCACG CATTTCGACA CATACGATAC AGGCACATAT TTTGCCTGAT GTCTGGGTCA ACGGAGATAA ATTCATGCTG CAGATCTTAC TGAGCAATCT CGTAGAAAAT GCCGTGAAAT ACGCCCCCCG GAATACCAGG ATCGATGTGT GTCTGGAGGA ATGCAATAAC AACCTGTTAA AGCTGAAAGT TACGGATGAA GGGCCAGGCA TACCGGCAGA TGAACGGGAA AGGATATTCC TCAAGTTTTA TCGTATAGGC AATGAGAATA CGCGTAAGGC GAAGGGGTCC GGACTCGGGC TGTTTCTCAG CAGAAAAATC GTACAGCAAC ATGGAGGAAC GATTGTCGTG AAAGATAATA TACCCGCAGG CGCCAGTTTT GAGATATCCT GGCCGGTATA TTCCATTCAA AGAGTGTAA
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Protein sequence | MQEGRAISFI YLFVLAYTIL ALVWWGVLLF NQSEQITRFE IQNLVLRTDS IAHPVEYHQE LTRIQTTEER RSVMFFGEGL IFLAIILLGG FFVYRAIWKQ MRLSQQQQNF MMAVTHELKS PIAAAKLNLE TLRKHKLDED KRLKLLDNTI RETNRLDQLC NNILLASQME SQRYQLFRED MDFSSLLENG VKEIQSRIST HTIQAHILPD VWVNGDKFML QILLSNLVEN AVKYAPRNTR IDVCLEECNN NLLKLKVTDE GPGIPADERE RIFLKFYRIG NENTRKAKGS GLGLFLSRKI VQQHGGTIVV KDNIPAGASF EISWPVYSIQ RV
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