Gene Cpin_0520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0520 
Symbol 
ID8356626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp617050 
End bp617613 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content46% 
IMG OID644962666 
Productcytochrome c oxidase subunit III 
Protein accessionYP_003120219 
Protein GI256419566 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0779441 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCAA TGAGCTTACA ACGCAATAAA ATACATCCGC ATAAATATTC TCTTTGGATA 
GCAATGGGTA GCATTACCAT GATGTTCATA GGGTTTACGA GTGCTTATGT TGTGAAGCGT
GCCCAGGCCA ACTGGTTCAC TTTCAACCTG CCGATGATTT TCTGGATCTC TACTGCAATC
ATTCTGACCA GCAGTGCGAC TATCCAGATG GCAGTGAAAC AGTTCCGTAA CAGGAACATG
CAGCGGTACA AACAGCTGAT TACGCTGACC GCAGCATTGG GTGTTGCCTT TGCTTTGTGC
CAATGGGTTG GTTTCCAACA AATGAATGAT AGTGGTCTGC GACTGAATGG TCCTGCTTCT
GTATCTTTCA TCTACGTTAT CGTGAGTGTA CACCTGTTAC ACGTACTGGG TGGTGTTGTT
GCACTGCTGA TCATGTTTGG CAAAGCATTT CGCACCCGGG TCCGTTCATA CAGCTCCGTT
CCTATAGAAG TTGCCGCTAC GTATTGGCAT TTTGTGGACG GGTTATGGAT TTACCTGTTG
ATATTTCTGA GTATTGCCAG ATAA
 
Protein sequence
MDAMSLQRNK IHPHKYSLWI AMGSITMMFI GFTSAYVVKR AQANWFTFNL PMIFWISTAI 
ILTSSATIQM AVKQFRNRNM QRYKQLITLT AALGVAFALC QWVGFQQMND SGLRLNGPAS
VSFIYVIVSV HLLHVLGGVV ALLIMFGKAF RTRVRSYSSV PIEVAATYWH FVDGLWIYLL
IFLSIAR