Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0520 |
Symbol | |
ID | 8356626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 617050 |
End bp | 617613 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644962666 |
Product | cytochrome c oxidase subunit III |
Protein accession | YP_003120219 |
Protein GI | 256419566 |
COG category | [C] Energy production and conversion |
COG ID | [COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0779441 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGCAA TGAGCTTACA ACGCAATAAA ATACATCCGC ATAAATATTC TCTTTGGATA GCAATGGGTA GCATTACCAT GATGTTCATA GGGTTTACGA GTGCTTATGT TGTGAAGCGT GCCCAGGCCA ACTGGTTCAC TTTCAACCTG CCGATGATTT TCTGGATCTC TACTGCAATC ATTCTGACCA GCAGTGCGAC TATCCAGATG GCAGTGAAAC AGTTCCGTAA CAGGAACATG CAGCGGTACA AACAGCTGAT TACGCTGACC GCAGCATTGG GTGTTGCCTT TGCTTTGTGC CAATGGGTTG GTTTCCAACA AATGAATGAT AGTGGTCTGC GACTGAATGG TCCTGCTTCT GTATCTTTCA TCTACGTTAT CGTGAGTGTA CACCTGTTAC ACGTACTGGG TGGTGTTGTT GCACTGCTGA TCATGTTTGG CAAAGCATTT CGCACCCGGG TCCGTTCATA CAGCTCCGTT CCTATAGAAG TTGCCGCTAC GTATTGGCAT TTTGTGGACG GGTTATGGAT TTACCTGTTG ATATTTCTGA GTATTGCCAG ATAA
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Protein sequence | MDAMSLQRNK IHPHKYSLWI AMGSITMMFI GFTSAYVVKR AQANWFTFNL PMIFWISTAI ILTSSATIQM AVKQFRNRNM QRYKQLITLT AALGVAFALC QWVGFQQMND SGLRLNGPAS VSFIYVIVSV HLLHVLGGVV ALLIMFGKAF RTRVRSYSSV PIEVAATYWH FVDGLWIYLL IFLSIAR
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