Gene Cpin_0494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0494 
Symbol 
ID8356600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp592267 
End bp593406 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content50% 
IMG OID644962640 
ProductCystathionine gamma-lyase 
Protein accessionYP_003120193 
Protein GI256419540 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTGG GAACTAAACT TATACACGCA GGCGTTACCC CTGATCCTTC AACCGGGGCA 
ATCATGACCC CGATCTTTCA GACGTCCACG TATGTGCAGA ACGCACCGGG CGACCATAAA
GGATATGAAT ATGCCCGCAC GCAAAACCCC ACCCGTGATG CGTTACAGAA TGCACTGGCA
GCCATCGAAA ACGGCAAATA CGGTATTTCC TTTGGTAGTG GTCTGGCTGC TACTGACGCA
GTCATGAAAC TGCTGCAACC TGGCGATGAA GTCATTGCCT CCAACGATCT CTATGGCGGC
ACGTATCGCA TATTTACCAA GATATTCGAA CGCTACGGCA TTAAGTTCCA TTTCATTGGT
ATGCAGGACG CCGAAAACAT CCGGCAGTAT GTCAACAAAA ACACAAAACT GCTCTGGATA
GAAACACCGA CCAATCCGCT GCTGAATATC ATTGATATCG CCGCCAGCGC AAAGATTGCA
AAGGAAAACA AGCTGCTGCT TTGTGTAGAT AATACCTTCG CCTCTCCATA CCTGCAAAAC
CCACTGGACC TGGGCGCAGA TATCGTCGTA CACAGCGCTA CCAAATATCT CGGTGGTCAT
AGCGATGTGG TACACGGCGC AATTGTGGTA AAAGAAGAAG CACTGGCAAA ACAACTCTAT
TTCATACAGA ACAGCTGTGG CGCAGTACCT GGTCCGCAGG ACTGCTTCCT TGTATTACGC
GGACTCAAAA CCCTGCACGT ACGTATGCAG CGTCATTGTG AAAATGGCGC TGTTATCGCA
CAGTTCCTTC GCCAGCATCC GAAAGTGGCC AAAGTGCATT GGTGCGGATT CGAAGATCAT
CCAAACCATC ACATCGCCAA ACAGCAGATG AGAGGCTTCG GCGGTATGAT CTCTTTCACC
CTGAAAGATG ACAGCCAGGA AGCTGCCTTT AAAGTACTGA GCGGCACCCA CCTGTTCTCC
CTCGCAGAAT CGCTGGGAGG AGTGGAGTCG CTCATAGGAC ACCCGGCCAG TATGACTCAT
GCCTCTATTC CCCGCGAAGA AAGGATCGCC AACGGACTGG TAGATTCCCT GATCCGATTG
AGTGTAGGTA TTGAAGATGC AGAAGATCTG ATCGCCGACC TGTCCAAAGC CATCGGATAA
 
Protein sequence
MKLGTKLIHA GVTPDPSTGA IMTPIFQTST YVQNAPGDHK GYEYARTQNP TRDALQNALA 
AIENGKYGIS FGSGLAATDA VMKLLQPGDE VIASNDLYGG TYRIFTKIFE RYGIKFHFIG
MQDAENIRQY VNKNTKLLWI ETPTNPLLNI IDIAASAKIA KENKLLLCVD NTFASPYLQN
PLDLGADIVV HSATKYLGGH SDVVHGAIVV KEEALAKQLY FIQNSCGAVP GPQDCFLVLR
GLKTLHVRMQ RHCENGAVIA QFLRQHPKVA KVHWCGFEDH PNHHIAKQQM RGFGGMISFT
LKDDSQEAAF KVLSGTHLFS LAESLGGVES LIGHPASMTH ASIPREERIA NGLVDSLIRL
SVGIEDAEDL IADLSKAIG