Gene Cpin_0419 details

Gene Information

• Locus tag: Cpin_0419
• ID: 8356525
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chitinophaga pinensis DSM 2588
• Kingdom: Bacteria
• Replicon accession: NC_013132
• Strand: +
• Start bp: 504609
• End bp: 507998
• Gene Length: 3390 bp
• Protein Length: 1129 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 644962565
• Product: hypothetical protein
• Protein accession: YP_003120118
• Protein GI: 256419465

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 57
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAACCGAC TTATTACCAG GTTATTAATA ATTACCGGTA CCCTATTACT TGGCCCGTAT 
CTATCTCAGG CACAGACCAA TACCGTGGAA TTTGGGCAGA ACCGCATACA GCATAAGAAT 
TTCAAATGGC GTTATTATCA AACCCGTCAT TTTAATACGT ACTTCAGCCA AAACGGTCTT 
GAACTGGGAA AATACGTTGC ACAAGCAGCA GAAAAGGAAT TGCCGCAGCT GGAACAGTTC 
ATGGAATTTA CCTTCCGTCA GCGCGTGAAC ATCGTTGTGT ACAACAGCTT CGGAGAAATG 
AAGCAATCCA ATATAGGCAT TGGCGTTGAC TGGCAGAATA CAGGTGGTAT TACCAAGCTG 
GTGGGCAACA AACTGATCGT TTATTTCGAT GGCGATCACC AGCACCTCTA CCGTCAGATA 
CGTGAAGGTA TTGCCCGTGT GATGCTCGAA AACCTGCTGT TTGGAGAAGA TATCGGAGAG 
TTTGCAGGTA ATACGATCCT GATCGATTTC CCAAAATGGT TTACAGATGG ATTTGTTGCA 
TATGCGGCTG AAAACTGGAA CCCTCAGCTG GATGATGAAC TGAAAGATGC GATTCAATCA 
GGCAGATATA AAGACTTTTA CCAGCTGGCC TACGAAAAAC CAACCCTGGC CGGACATGCG 
TTCTGGTATT ATGTAGAAAG TAAATATGGT AAGGATGCAG TGCCTTATCT GATGTATATC 
TCCCGTATTA ACCGTACCCT GAAAAAAGGC TTTGAGCAGG TATTGAACCA GAAACCGAAA 
AATGCGCTCA AAGACTTCAT GGTATTCAAT ACCAAACGTT ACCAGGATGA CAACCGCCGT 
CGCCGCCAGA GTACCCGTGG CGCACGTACC GTTGTATCCA GAGAATTGAA CAAATCAGAC 
TTCTACCGTT TCCAGGCTAA CCCGAAGAGC AACTACTACG CGGTGGTTGA ATTCTCCAAA 
GGCCTGTATA AAGTACAGAT CCAGTTTGCT GACATGAAGC CTAAAGTGCT CCTGCGCAGT 
GGTGTGAGAA TGCAGGCCAG CCAGCTGGAC CCTAACTACC CGCTGCTGGC ATGGAACCAG 
AAAGGTAACC GCCTGGCCAT CGTATATGAG CATGAAGGCG TTACCAAACT CATGGTATAT 
GACCTGGTTA CCAGGACAAG CACCAAAGAA GATCTGCCAA GATTCGACAG GATCATCGAT 
GTGAAATACT TCTTCGAGTA TGACAACTCC CTGCTGCTGT CTGCAGTGAA AAACGGGCAT 
ACAGATATCT ACACTTACAG CATCAACAAA AAGACAGCTG AACAGATCAC CAACGACGTG 
TATGATGACC TGGATCCGTC TTTTGTATCT TTCCCTGGTA AGAGTGGTAT CATTTACTCC 
TCAAACAGAC CTTCACCAAC CGCGAAAAGC GGCGATACCA TATTGCCTGC CGGACATTAT 
AACATCTTCC TGATCGACAA CTTTAACAAG AGTGCCGACA AGCAGATATC CCAGCTGACA 
GATATGAAAT ACGGTGATGC ACGTTCACCG TTACAGTATA ACACGACCCA CTTTACGTTC 
GTATCTGACG TAAACGGTAT CCGTAACCGT TATGCAGGTT TCTTCAAAAC TGAAAGAGCC 
GGAGTAGATT CCCTGTTCTT TGTAGGTTCA GAGATCCTCC ATAACCCCGA CAAAGCAGAT 
CTCGATTCTG CCCTGGCAGA ATATGGCGCT ACGGCTCCGG ACTCTGTAAT GGCTGTTTCC 
CTGACAAAAG ACTCTACCTA TACATTCCCG ATGTCCAACT ATGCTTATGG TATCAAAGAA 
TCCAGAGGCG CAGGCGACCA ATCGGAAGTA TCACAGGTGA TTCAGCAGTA TGGTTTCAAG 
AACCTCCAGA AACTGAGGAT CGATACCGTA ACGTTGCGTA AGAGAAACGT CAGCAGCCGT 
CCGACAACCT TCAGGTCCCG TCAGATGCAC GAGGATAGTA TCCGCCTCGG TCTGCCAACC 
TATCATGAGA AGGCCCAGAC AGATACCGCG AAACATGGTG ATTTCTTCCA GAGCGAGTTC 
GCACAGGAAG CACCAGATAC AACAGCTGCC GCAGAAGCAA TGGCTATACA GATACCGCTG 
ATTGAGCCGG TACTGAAAAA GGCCAAACTG CTGCCATATA AATGGAAATT CTCTTCAGAC 
TACCTGATCC TACAACTGGA TAACTCTGTG TTGATCAACA GATATCAGCC ATTTACCGGT 
CCTCCTGTAA GTCCGATCAG ACTGGCTGAC CCTGTTAATG GTCTGATCCG TATCGGGGTG 
AGCGACATGA TGGAAGATGT GAAGATCAAT GGTGGATTCA GATTCCCTTC CAGCCTGGAT 
GGTACGGAGT ACTTCATCTC CGGCTCTTAT CTGAAAAAAC GCTTTGATTA TAAGTTCACT 
TACTACCGCA GGGTGGATAA ATACAGTAGC CTGGGTGTGG ATACTTCAGG TAACCTACTG 
GATTACCCAG CCAAACTGAA AACAAACCTC TTCCAGTTCG ATATTCGTTA TCCGTTCGAT 
CAGGCAAGAA GTATCCGTTT ACAGGTAGGT CTGCGTAACG ATAAGTTCGT CGTATCAGCA 
TCCGATGCTA ATACACTGAA GATGAAAAAC TTTGCTGACA ACTATGCATT ACTTCGTCTG 
GAATATGTGT ATGACAATAC CATCAATCCG GCTACTAACA TCTGGCATGG TACCCGTTAT 
AAGATCTATG GTGATATGAA TGCCCAGATT AACGGTGACC TGAACGATAT ATTTGACCAG 
GGTGCTGCTG CAGGTAAAGG CAAGTTCACA TATAACATGG GTATTGACGT AAGACATTAC 
CACTCTATTT ACCGCAACTT CATCTGGGCT ACCCGCTTCT CGGCTGACCT GTCATGGGGT 
ACACGTAAAC TGCTGTATTA CCTGGGTGGT AGTGACAACT GGCTGACTCC TAAGATCAAT 
ACCAATACAC CGGTAAATAT GAACGCCAAC TACGCGTATC AGACACTGGC TACACCACTG 
CGCGGTTACA AACAGAACGC CCGTAACGGT AATAACGTAA TGGTATTCAA CACAGAATTA 
CGTTTGCCGG TATTTGCGAC CTTCATGAAC AAGCCGATCA ACTCAGCGCT CGTTCGTAAC 
TTCCAGGTGA CCAGCTTCGT AGACATCGGA ACTGCCTGGA ACGAGAAACT GAGCTTCAAA 
GATGCTAACT ACACTTATTA TACAGGAAAT GACGGAACGG TAACTGTGAA AGTGAAAGAA 
GGTTTCCTCG GACCATTTGT AGGCGGTTAT GGTTTCGGTG CCCGTACCAC ACTCGCAGGT 
TATTTCCTGA GAATAGATGC AGGCTGGCCG GCAGTAGCAT TCTTCCGTGG CAAACCGATC 
TGGTATTTTG GATTGGGAGT TGACTTCTAA 

 

Protein sequence

MNRLITRLLI ITGTLLLGPY LSQAQTNTVE FGQNRIQHKN FKWRYYQTRH FNTYFSQNGL 
ELGKYVAQAA EKELPQLEQF MEFTFRQRVN IVVYNSFGEM KQSNIGIGVD WQNTGGITKL 
VGNKLIVYFD GDHQHLYRQI REGIARVMLE NLLFGEDIGE FAGNTILIDF PKWFTDGFVA 
YAAENWNPQL DDELKDAIQS GRYKDFYQLA YEKPTLAGHA FWYYVESKYG KDAVPYLMYI 
SRINRTLKKG FEQVLNQKPK NALKDFMVFN TKRYQDDNRR RRQSTRGART VVSRELNKSD 
FYRFQANPKS NYYAVVEFSK GLYKVQIQFA DMKPKVLLRS GVRMQASQLD PNYPLLAWNQ 
KGNRLAIVYE HEGVTKLMVY DLVTRTSTKE DLPRFDRIID VKYFFEYDNS LLLSAVKNGH 
TDIYTYSINK KTAEQITNDV YDDLDPSFVS FPGKSGIIYS SNRPSPTAKS GDTILPAGHY 
NIFLIDNFNK SADKQISQLT DMKYGDARSP LQYNTTHFTF VSDVNGIRNR YAGFFKTERA 
GVDSLFFVGS EILHNPDKAD LDSALAEYGA TAPDSVMAVS LTKDSTYTFP MSNYAYGIKE 
SRGAGDQSEV SQVIQQYGFK NLQKLRIDTV TLRKRNVSSR PTTFRSRQMH EDSIRLGLPT 
YHEKAQTDTA KHGDFFQSEF AQEAPDTTAA AEAMAIQIPL IEPVLKKAKL LPYKWKFSSD 
YLILQLDNSV LINRYQPFTG PPVSPIRLAD PVNGLIRIGV SDMMEDVKIN GGFRFPSSLD 
GTEYFISGSY LKKRFDYKFT YYRRVDKYSS LGVDTSGNLL DYPAKLKTNL FQFDIRYPFD 
QARSIRLQVG LRNDKFVVSA SDANTLKMKN FADNYALLRL EYVYDNTINP ATNIWHGTRY 
KIYGDMNAQI NGDLNDIFDQ GAAAGKGKFT YNMGIDVRHY HSIYRNFIWA TRFSADLSWG 
TRKLLYYLGG SDNWLTPKIN TNTPVNMNAN YAYQTLATPL RGYKQNARNG NNVMVFNTEL 
RLPVFATFMN KPINSALVRN FQVTSFVDIG TAWNEKLSFK DANYTYYTGN DGTVTVKVKE 
GFLGPFVGGY GFGARTTLAG YFLRIDAGWP AVAFFRGKPI WYFGLGVDF