Gene Cpin_0344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0344 
Symbol 
ID8356449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp408305 
End bp409237 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content47% 
IMG OID644962490 
Producthypothetical protein 
Protein accessionYP_003120044 
Protein GI256419391 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA GCCCTCAATT AATCGTTCTT TTAGGCCTTA TGGCATCCAC GTTTTTACTG 
GGAAGTTGTA AAAAAGACAA TGACTCCCTT CAATCAAAAA AGCCGGTGAC CGAAGAAGCA
GCGGCAGAAA TACCGCCCGC GACCTGGCAG GAACACTGGT TTGAACACGT ACAGCTCCTA
AAGCGTGTTT ATTACAATGA TCACATTGCG GTGTATTATG ACAATGATAT GCCTACAAAT
GTTACGTGGC CTTATCGCCG TCTGGATAGC ATCTGGCGCT ATACCAAAAG AACATACGGT
GAATTCGGTC CGGATAAACG CCTGTTCGTA ATCCTGCATG AAAATAAGTA TAGTGGCGGA
CATCCTTCAA CTTATTTTGA CGCCAGCCAT GATTTCCGCA ATGTCATTGA CGTAGGACTA
AACGGCTCAT GGGCTGACAG CACCGGGCAA CCGCTCCATA TTACCGCTCA TGAAGTAGGG
CATATCGTGG AAGGCGCCTC CAAAGGATTT CACAATTCGC CTGCATTCCC GCTGTGGGGT
GACAGTAAGT GGATGGAAAT TTATCAGTAT GATGTTTACA AATCACTGGG TTGGACGACT
ATCGCGAATG CCTGGTATAA TGACATGTGG AATAAGGTCG ATAACTTCCC GGTAGCGAAT
ACCCGCTGGT TCAGGAACTG GTTCTTTCCT ATTTACAGTC AGCATGGCGG TACCGCCACA
CTGAATAAAT TCTTCGCTTT GTTAGCACAG TACTTTCCTA AAAATGGCAG CAACTATGCC
CGTAATATGA ACTGGGGAGA GTTTGTGCAT TTCTGGAGCG GCGCTGCAGG CGTCAATCTG
AAAGCACAGG CGACTATCGC CTTCGGATGG CCCGCCAGCT GGGAAACACA GTTCCAGCAG
GCAAGGCAGA CCTTCCCGAA TATCACGTAT TAA
 
Protein sequence
MKKSPQLIVL LGLMASTFLL GSCKKDNDSL QSKKPVTEEA AAEIPPATWQ EHWFEHVQLL 
KRVYYNDHIA VYYDNDMPTN VTWPYRRLDS IWRYTKRTYG EFGPDKRLFV ILHENKYSGG
HPSTYFDASH DFRNVIDVGL NGSWADSTGQ PLHITAHEVG HIVEGASKGF HNSPAFPLWG
DSKWMEIYQY DVYKSLGWTT IANAWYNDMW NKVDNFPVAN TRWFRNWFFP IYSQHGGTAT
LNKFFALLAQ YFPKNGSNYA RNMNWGEFVH FWSGAAGVNL KAQATIAFGW PASWETQFQQ
ARQTFPNITY