Gene Cpin_0333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0333 
Symbol 
ID8356438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp392229 
End bp393107 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content49% 
IMG OID644962479 
Producthypothetical protein 
Protein accessionYP_003120033 
Protein GI256419380 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000197043 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.839934 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGAC AACAAATTGT CAATGTCGCC AGGGCCGCAG CCCTCTCCAT GACCGTATTA 
CTGTCAGCAT GTACAAAAGA AAGCGTTCAG CAGGAAGAAC GTCTTGCCGC TGGCAGCAGT
TTAGCCGCTC AGGCAGTGGG CAATATTATC CTGAATTCCT GGAGTGTGAA CTGGGATAAT
TATACACATG GGGTGACTTA TACCGCCAAT AACGGCGCTA CCGACTTTGG TAACGTTACC
GGCTGGGTAG ATAGCCGGGG GATGATCTCC AATGGTAATC TGCGTATTAC CCTCTTAAAG
AATGCCTTAT CCGGTGCAGG TGGGGTTGTC GCCAACATCG ACATTTCTGA TGGTACTGCC
TATGAAGTAG ACTACGATGT GAGGTTCCAC AGCCAGTTTG ACTGGAGCAG GGGTGGAAAA
CTGGGCTTTG GTTTCTCTAT CGGCGATGGT AATACCGGTG GTGATCCGGG ATGGGATGGT
AATGGCGGTA CTGCCCGTCT GATGTGGTAC CAGACAGATG CCGGCAGGGT ATTCTTCCAG
CCTTATGTTT ACTTCAAAGA CCAGTCTGGT CAGTACGGTG AAACTTTTGG TAAGTCTTAT
CCATCCAGCG GTAGTCTGAA CAAAGGGCAG ACCTACCATG TACACCTGTA TGTAAAGAGC
AACACGGGTA GTAATACCAA TGGTCACGTA CAGTATGTGA TTGATGGTAC AGTAGTGCTG
GATCAGGATA TCCGCTGGAC GACCAACGAC AGTAAACGTC TCATCAGAGG CCTGACCTTC
CATACTTTCC GTGGTGGCAG CCAGACTTAC TGGCAATCAT CTACAGACGG TTATATCTAC
TACGATAATC TGAAAGTGCA TAGAATCAGT ACCAACTGA
 
Protein sequence
MNRQQIVNVA RAAALSMTVL LSACTKESVQ QEERLAAGSS LAAQAVGNII LNSWSVNWDN 
YTHGVTYTAN NGATDFGNVT GWVDSRGMIS NGNLRITLLK NALSGAGGVV ANIDISDGTA
YEVDYDVRFH SQFDWSRGGK LGFGFSIGDG NTGGDPGWDG NGGTARLMWY QTDAGRVFFQ
PYVYFKDQSG QYGETFGKSY PSSGSLNKGQ TYHVHLYVKS NTGSNTNGHV QYVIDGTVVL
DQDIRWTTND SKRLIRGLTF HTFRGGSQTY WQSSTDGYIY YDNLKVHRIS TN