Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0333 |
Symbol | |
ID | 8356438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 392229 |
End bp | 393107 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644962479 |
Product | hypothetical protein |
Protein accession | YP_003120033 |
Protein GI | 256419380 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000197043 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.839934 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGAC AACAAATTGT CAATGTCGCC AGGGCCGCAG CCCTCTCCAT GACCGTATTA CTGTCAGCAT GTACAAAAGA AAGCGTTCAG CAGGAAGAAC GTCTTGCCGC TGGCAGCAGT TTAGCCGCTC AGGCAGTGGG CAATATTATC CTGAATTCCT GGAGTGTGAA CTGGGATAAT TATACACATG GGGTGACTTA TACCGCCAAT AACGGCGCTA CCGACTTTGG TAACGTTACC GGCTGGGTAG ATAGCCGGGG GATGATCTCC AATGGTAATC TGCGTATTAC CCTCTTAAAG AATGCCTTAT CCGGTGCAGG TGGGGTTGTC GCCAACATCG ACATTTCTGA TGGTACTGCC TATGAAGTAG ACTACGATGT GAGGTTCCAC AGCCAGTTTG ACTGGAGCAG GGGTGGAAAA CTGGGCTTTG GTTTCTCTAT CGGCGATGGT AATACCGGTG GTGATCCGGG ATGGGATGGT AATGGCGGTA CTGCCCGTCT GATGTGGTAC CAGACAGATG CCGGCAGGGT ATTCTTCCAG CCTTATGTTT ACTTCAAAGA CCAGTCTGGT CAGTACGGTG AAACTTTTGG TAAGTCTTAT CCATCCAGCG GTAGTCTGAA CAAAGGGCAG ACCTACCATG TACACCTGTA TGTAAAGAGC AACACGGGTA GTAATACCAA TGGTCACGTA CAGTATGTGA TTGATGGTAC AGTAGTGCTG GATCAGGATA TCCGCTGGAC GACCAACGAC AGTAAACGTC TCATCAGAGG CCTGACCTTC CATACTTTCC GTGGTGGCAG CCAGACTTAC TGGCAATCAT CTACAGACGG TTATATCTAC TACGATAATC TGAAAGTGCA TAGAATCAGT ACCAACTGA
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Protein sequence | MNRQQIVNVA RAAALSMTVL LSACTKESVQ QEERLAAGSS LAAQAVGNII LNSWSVNWDN YTHGVTYTAN NGATDFGNVT GWVDSRGMIS NGNLRITLLK NALSGAGGVV ANIDISDGTA YEVDYDVRFH SQFDWSRGGK LGFGFSIGDG NTGGDPGWDG NGGTARLMWY QTDAGRVFFQ PYVYFKDQSG QYGETFGKSY PSSGSLNKGQ TYHVHLYVKS NTGSNTNGHV QYVIDGTVVL DQDIRWTTND SKRLIRGLTF HTFRGGSQTY WQSSTDGYIY YDNLKVHRIS TN
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