Gene Cpin_0259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0259 
Symbol 
ID8356364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp309740 
End bp310552 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content46% 
IMG OID644962406 
Producthypothetical protein 
Protein accessionYP_003119960 
Protein GI256419307 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGG ATTTTGTGGT CGTGATGGCC AGCGTAGCGG GCGCACTGCT CGTACTTGTA 
TCATTGTTCT CCTTTATAGC TACTCCTGAG GAGCGTAAGC CCGCCAAAGA AGATGATAAA
CCAACCATTG TGCTTGTGCA TGGCGCCTTT GCTGATGGGT CTTCCTGGAA CAAGGTAATA
CCGGCGTTAC AGAAGGAAGG ATACCATACT ATTGCTGTAC AGAACCCGTT GACTTCCCTG
AGTGATGATG TGGCATTTGT AGAACGGGCT ATCGCAGAAG CAAAAGGAAA GGTGATACTG
GTAGGACATT CCTGGGGTGG TGTTGTTATT ACCCAGGCCG GGAACAACGA AAAAGTTCAG
TCGCTTGTTT ATATCGCCGC TTATGCACCG GATGAAGGAC AAAGCATTGA AAGTATTAGC
AAGGATGCAT ATGAGGTAAG AAAGTTGCCT AATGTACAGG GGCTTGCAGA TCCTGTTGTT
AGCAGTGATG GTTATATCCG ACTGAAGGAA GAAACGGTAG TAAATCATTT TGCACAGGAC
CTGCCGGCAG ACGACGCGAA GATCATTGCA GCTGGACAAG GCCGCTTTCA TTTTAGTACA
ATAACAGCTA AAGTAGGAAA ACCAGCCTGG AAGAATAAAC CTAGTTTTTA TGTCGTATCG
GACAACGATC ATATGATTTC ACCGGTACTG GAAAGCGAAA TGGCGAAAAA TATTCACGCA
ACTACCTATC ACTTGCCTGC AAGCCATGTG GCGATGTTAT CACAACCAGC CGCTGTGGTA
AAAGTTATCC TCGCCGCAGC GGGTAAAAAA TAG
 
Protein sequence
MKKDFVVVMA SVAGALLVLV SLFSFIATPE ERKPAKEDDK PTIVLVHGAF ADGSSWNKVI 
PALQKEGYHT IAVQNPLTSL SDDVAFVERA IAEAKGKVIL VGHSWGGVVI TQAGNNEKVQ
SLVYIAAYAP DEGQSIESIS KDAYEVRKLP NVQGLADPVV SSDGYIRLKE ETVVNHFAQD
LPADDAKIIA AGQGRFHFST ITAKVGKPAW KNKPSFYVVS DNDHMISPVL ESEMAKNIHA
TTYHLPASHV AMLSQPAAVV KVILAAAGKK