Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0259 |
Symbol | |
ID | 8356364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 309740 |
End bp | 310552 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644962406 |
Product | hypothetical protein |
Protein accession | YP_003119960 |
Protein GI | 256419307 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGG ATTTTGTGGT CGTGATGGCC AGCGTAGCGG GCGCACTGCT CGTACTTGTA TCATTGTTCT CCTTTATAGC TACTCCTGAG GAGCGTAAGC CCGCCAAAGA AGATGATAAA CCAACCATTG TGCTTGTGCA TGGCGCCTTT GCTGATGGGT CTTCCTGGAA CAAGGTAATA CCGGCGTTAC AGAAGGAAGG ATACCATACT ATTGCTGTAC AGAACCCGTT GACTTCCCTG AGTGATGATG TGGCATTTGT AGAACGGGCT ATCGCAGAAG CAAAAGGAAA GGTGATACTG GTAGGACATT CCTGGGGTGG TGTTGTTATT ACCCAGGCCG GGAACAACGA AAAAGTTCAG TCGCTTGTTT ATATCGCCGC TTATGCACCG GATGAAGGAC AAAGCATTGA AAGTATTAGC AAGGATGCAT ATGAGGTAAG AAAGTTGCCT AATGTACAGG GGCTTGCAGA TCCTGTTGTT AGCAGTGATG GTTATATCCG ACTGAAGGAA GAAACGGTAG TAAATCATTT TGCACAGGAC CTGCCGGCAG ACGACGCGAA GATCATTGCA GCTGGACAAG GCCGCTTTCA TTTTAGTACA ATAACAGCTA AAGTAGGAAA ACCAGCCTGG AAGAATAAAC CTAGTTTTTA TGTCGTATCG GACAACGATC ATATGATTTC ACCGGTACTG GAAAGCGAAA TGGCGAAAAA TATTCACGCA ACTACCTATC ACTTGCCTGC AAGCCATGTG GCGATGTTAT CACAACCAGC CGCTGTGGTA AAAGTTATCC TCGCCGCAGC GGGTAAAAAA TAG
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Protein sequence | MKKDFVVVMA SVAGALLVLV SLFSFIATPE ERKPAKEDDK PTIVLVHGAF ADGSSWNKVI PALQKEGYHT IAVQNPLTSL SDDVAFVERA IAEAKGKVIL VGHSWGGVVI TQAGNNEKVQ SLVYIAAYAP DEGQSIESIS KDAYEVRKLP NVQGLADPVV SSDGYIRLKE ETVVNHFAQD LPADDAKIIA AGQGRFHFST ITAKVGKPAW KNKPSFYVVS DNDHMISPVL ESEMAKNIHA TTYHLPASHV AMLSQPAAVV KVILAAAGKK
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