Gene Cpin_0258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0258 
Symbol 
ID8356363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp308849 
End bp309700 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content43% 
IMG OID644962405 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003119959 
Protein GI256419306 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGATC CAATATTTTA TAGAACTGTC GACATAGATG GGCTAAATAT TTTTTATCGC 
GAATCAGGTG CACCGTCACG TCCGGTCCTG TTGTTACTAC ATGGTTTTCC CTCTTCTTCA
CATATGTTCC GGGATCTTAT TGCTGATTTA TCGGGTACAT ATCATATTGT TGCGCCTGAT
TATCCCGGAT TCGGTCAAAG CAGTGCCCCG GATGTAAAAC AGTTTTCGTA TACATTTGAT
AACCTGTCTG TAGTCATTGA ACGTTTTATT GACCGTCTGC AACTTCGGAA CATAAGCATG
TATATTCAGG ATTATGGGGG GCCTATAGGA CTAAGGATCG CCAGCCGACG TCCTGAATTG
ATCCGTTCAT TGATCATACA AAATGCAAAT GCTTATAACG AAGGTTTAGG CGATGCACTG
GAGCCATTGG TAGCCTATAT CCGGGATCCG GGCGCTGCCC AGGAAAAAGA AGCCCGTTTT
TTTCTGACAT CAGCGGCTAC AAAATGGATG TATCTGAATG GCGCTACCGA TAAAACCCGG
ATAAGTCCGG ATAGCTATAT AATCGATCAA TACTATCTTG ACCGGCCAGG AAACGATGAA
ATACAGCTTG CTCTTTTCCG GGATTATGGC AGTAATATTG CCCTGTATGA TGAATGGCAT
AGGTATTTTA AGGAACATCA GCCTGATACA ATGGTTGTAT GGGGTAAAAA CGATGCGATG
TTTATAGCGC CTGGTGGAAA TGCATACCGG AAAGATCTGC CCAATGCAGC AATCATACAG
ATCGATGGGG GGCATTTTTT GCTTGAGGAG CACCACGAAC AAGTTGCGGG TTTAATAAAA
GGATTCATTT AA
 
Protein sequence
MKDPIFYRTV DIDGLNIFYR ESGAPSRPVL LLLHGFPSSS HMFRDLIADL SGTYHIVAPD 
YPGFGQSSAP DVKQFSYTFD NLSVVIERFI DRLQLRNISM YIQDYGGPIG LRIASRRPEL
IRSLIIQNAN AYNEGLGDAL EPLVAYIRDP GAAQEKEARF FLTSAATKWM YLNGATDKTR
ISPDSYIIDQ YYLDRPGNDE IQLALFRDYG SNIALYDEWH RYFKEHQPDT MVVWGKNDAM
FIAPGGNAYR KDLPNAAIIQ IDGGHFLLEE HHEQVAGLIK GFI