| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0256 |
|---|
| Symbol | |
|---|
| ID | 8356361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 306708 |
|---|
| End bp | 308063 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 644962403 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_003119957 |
|---|
| Protein GI | 256419304 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGAA GATTGAGGTT TACACGCTTA GTTGCAATAT GCACGGTATC GCTGATCATA
TTGTTTCAGA TCTATTGGGT GTATAATAAC TTTAAAGTCA GTCAGCATAA TTTTATAACT
TCAGCCAGGT ATGCATTGCA GAAAAGTATC AGTGCTTATC AGCTCCGGCA GAGTGAATTG
CCTACTTCTC TGAAGTACAA AGACCCCACG CTTACATTTT TTCTGAGAAC AATTCCTAAC
CGGGATTCCA TTGCTTTTGA TACACCGGCA GTCATCAAAC CCTTTCATGC CGAATTTTTA
ACAGTGAAAA TTGACGAGTA TAATATATCG GAAGTGAATG CTATCATGGG AAGATTGATA
TCACAGCAGT TCCGTAGGCC GATAAATCTC GATTCTCTGG GCGTGCTATA TAAGCAGGAG
CTAAGTAGGG AGAATATTGC AGTTTCATTT AAACTTATGT TATTAGATAG TACAACAGTG
CTTTCACAAG ATGAAATTTC AGTTCCGATA AAATTTCATA GATCTCCTGT TGTTATTGTA
AAGGCTATTC CTGAACATTT ATCAGCTATG TTATGGAAGC AAAATATTCT TCCGGCTGTC
ATCTCTCTTG TACTGATACT GTTATCTGCG GGAAGTCTCT TTTTTATGGG AAGCATGATG
TTGCGTCAGA TGCGGCTCAA TAACTTTAAG GACGACTTCA TTAATAATAT TACACATGAG
TTGAGAACTC CGCTGACCAT CCTGAAATCA TCAATAGATG CTTTAAAGAG CTTTGGTGCT
TCGTCAGATC CCGATAGGCT TGAAAGGTAT CTGAGTATTA ATTTGAACAT AATTAAAAAG
CTGGATAAAG ACATAGACCG AATTTTAGAG ATAAGCAAGT ATGAACACGG CATCTTGTAC
ACACAGCTCA CGACGGTTAA TTTAAGGGAG CTCGCTGTAG AGGTAGCTGG CCGTTTTGAC
TTACATGCAC CGGATACGAT CGTTATCTTC AATCCTTTGC ATAATGATGT GGTCAGTACA
GACCGTTTTA TTATAGATAC AATTTTGAGT AACCTGATAG ATAATGCCAT TAAATATTCA
CAAGGGAATG TTTGCATAAA TATTAGCTTT CCTCCTATCG CTAATGGCTG GAAATTGCAG
ATACAGGATA ACGGGAAAGG AATTGATCCG TTTCATTTAC CTTTTATATT CGACAAGTTT
TACCGCGTAC ATTCACAAAA TGTGCATGAA GTCAAAGGTT ATGGTCTGGG ATTGAGCTAT
GTCAAGCTAT TGGTCACAGC GTTAAATGGA CAGATTTTCG TCACGAGTCA GATTAATAAA
GGAACAATTT TTACTATTCA GTTTCATAAT GAATAA
|
|---|
| Protein sequence | MKRRLRFTRL VAICTVSLII LFQIYWVYNN FKVSQHNFIT SARYALQKSI SAYQLRQSEL
PTSLKYKDPT LTFFLRTIPN RDSIAFDTPA VIKPFHAEFL TVKIDEYNIS EVNAIMGRLI
SQQFRRPINL DSLGVLYKQE LSRENIAVSF KLMLLDSTTV LSQDEISVPI KFHRSPVVIV
KAIPEHLSAM LWKQNILPAV ISLVLILLSA GSLFFMGSMM LRQMRLNNFK DDFINNITHE
LRTPLTILKS SIDALKSFGA SSDPDRLERY LSINLNIIKK LDKDIDRILE ISKYEHGILY
TQLTTVNLRE LAVEVAGRFD LHAPDTIVIF NPLHNDVVST DRFIIDTILS NLIDNAIKYS
QGNVCINISF PPIANGWKLQ IQDNGKGIDP FHLPFIFDKF YRVHSQNVHE VKGYGLGLSY
VKLLVTALNG QIFVTSQINK GTIFTIQFHN E
|
|---|
| |