Gene Cpin_0225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0225 
Symbol 
ID8356329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp271312 
End bp271857 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content44% 
IMG OID644962371 
ProductYceI family protein 
Protein accessionYP_003119926 
Protein GI256419273 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.202963 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAC TGATTGCTTT GCTTGCAGGA CTTTTCCTCG CACATGCCGG ATTCGCACAG 
GATGTATTTA TGTGCCGTAA TACCGGACTT TCCTTCTTCT CGGCTACGCC TGTTGAAGAC
ATAGACGCTA CCACCGATAA AGGGACGTCT GCCATGAATG TAAAGACCGG TGAACTCTAT
TTCAAAGTTG CCGTAAATAC CTTCAAGTTT AAAAAACAGC TCATGGAAGA GCATTTTAAT
GAAAATTACA TGGAGAGCGA CAAATACCCT TACGCGATAT TTAAGGGCAA ACTGGTATCC
CCTCCGGATC TGCATAAAGA TGGGACCTAT GAAGTAGCAG TTGACGGTGT ACTGTCATTG
CATGGCGTGG ATAAACCTTA CAAGGAGAAA GCCACTATCA TCGTAAAAGA CGGCAAACCT
TCCGCCAACG CCAAATTCAA TGTAAAACTG GCGGATCATC ACATTAAAAT ACCAACACTG
GTTATCAAAA ACATTGCAGA AGTAGTGGAA GTAACCGTAA AAGCGGCTTA CAGCGCTGCT
TCCTGA
 
Protein sequence
MKQLIALLAG LFLAHAGFAQ DVFMCRNTGL SFFSATPVED IDATTDKGTS AMNVKTGELY 
FKVAVNTFKF KKQLMEEHFN ENYMESDKYP YAIFKGKLVS PPDLHKDGTY EVAVDGVLSL
HGVDKPYKEK ATIIVKDGKP SANAKFNVKL ADHHIKIPTL VIKNIAEVVE VTVKAAYSAA
S