| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0216 |
|---|
| Symbol | |
|---|
| ID | 8356316 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 262001 |
|---|
| End bp | 263275 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644962358 |
|---|
| Product | seryl-tRNA synthetase |
|---|
| Protein accession | YP_003119917 |
|---|
| Protein GI | 256419264 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0172] Seryl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTACAAG TTCCGTTCAT TCGTCAAAAC AAGGACCAGG TACTGGAAAG GCTGACCCTG
AAGAACTTCA GGGAGCTGGA ACTGGTGGAC CAGGTACTTG AGCTGGACGA CAAGCGCAAG
AAATTAACCC TTGAGTATGA TGAAACACAG GCCAAAGTAA ACTCGAATTC CAAGGAAATC
GGTAAACTGA TGGCACAGGG GCAGAAAGAT GAAGCGGAAT CTCGTAAATC GGAAGTAGCA
TCACTGAAAG CAAGACTGCA GCCTATTAAC GAAGAACTCG CGGCTACAGA AAAGCTTTTG
CACGATACAT TGGTAAAACT GCCAAACCTG CCTTCTCCGC TGGTGCCTCC CGGTAAAACA
CCGGAAGAGA ACGTGGAAGT CCGCAAGGGT GGCGATATCC CTCAGTTACA TGAGGGCGCT
GTGCCTCACT GGGACCTGGT GAAGAAATAT GACCTGATCG ACTTCGAACT GGGTAACAAG
ATCACAGGCG CTGGTTTCCC GGTTTATAAA AACCGTGGAG CACGTTTACA ACGCGCTATG
ATCCAGTATT TCCTGAACTT CAATACCGAT AAAGGTTACA CTGAATTCCA GGTGCCTCAC
CTGGTGAACA GTGATTCCGG ATATGGTACA GGTCAGCTGC CTGATAAAGA AGGACAGATG
TACTTCGTAG GAGAAGATGA ATTATACCTC ATCCCTACAG CCGAAGTACC TCTGACGAAT
ATCTTCAGAG ATGAAATACT GAAAGACACC GAGCTGCCGG TAAAACTGAC TGGCTATACG
CCTTGTTTTC GTCGTGAAGC AGGTTCTTAT GGTAAAGACG TACGTGGTCT GAACCGTTTG
CACCAGTTTG ACAAGGTAGA GGTTGTACAG GTGGTACATC CGGAGAAATC TTATGAGATC
CTGGATGAAA TGGTAGCGCA TGTGGAAGAA CTGGTGAAGT CACTGGAACT GCCATACCGC
ATACTGCGTC TTTGCGGTGG TGATATGGGA TTTGCTTCTG CGCTGACCTA CGATTTCGAA
GTATACAGCA CTGCACAGCA GAAATGGCTG GAAGTGAGCT CTGTATCCAA TTTTGAGTCT
TTCCAGGCAA ACCGCGCGAA GATCCGTTTC AAAGACGGTG GTGGTAAACC ACAGCTGGTA
CATACGCTGA ATGGCAGCTC CCTGGCATTA CCGCGTATCC TGGCTTGTAT CCTGGAAAAC
AACCAGACAC CGGAAGGTAT CAATATTCCG AAGGTATTAC AACCTTATTT CGGCGCCGAT
AAGATCGCAC TGTAA
|
|---|
| Protein sequence | MLQVPFIRQN KDQVLERLTL KNFRELELVD QVLELDDKRK KLTLEYDETQ AKVNSNSKEI
GKLMAQGQKD EAESRKSEVA SLKARLQPIN EELAATEKLL HDTLVKLPNL PSPLVPPGKT
PEENVEVRKG GDIPQLHEGA VPHWDLVKKY DLIDFELGNK ITGAGFPVYK NRGARLQRAM
IQYFLNFNTD KGYTEFQVPH LVNSDSGYGT GQLPDKEGQM YFVGEDELYL IPTAEVPLTN
IFRDEILKDT ELPVKLTGYT PCFRREAGSY GKDVRGLNRL HQFDKVEVVQ VVHPEKSYEI
LDEMVAHVEE LVKSLELPYR ILRLCGGDMG FASALTYDFE VYSTAQQKWL EVSSVSNFES
FQANRAKIRF KDGGGKPQLV HTLNGSSLAL PRILACILEN NQTPEGINIP KVLQPYFGAD
KIAL
|
|---|
| |