| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0200 |
|---|
| Symbol | |
|---|
| ID | 8356300 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 248483 |
|---|
| End bp | 249895 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644962343 |
|---|
| Product | Protein of unknown function DUF1800 |
|---|
| Protein accession | YP_003119902 |
|---|
| Protein GI | 256419249 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5267] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCACC TGGCATGGAG AGCCGGATTC GGTGCTTCTC CAGCCATAAT TGACGAGTGG
ACCCATAAAA AACGCCGTCA GGTCATCAGT AAGATCCTGG CGGGACCTGA AAAAGACGCA
CAAACGCCTT TGAAAGTCCG CGACGCTTCC GATCTGCCTG ACCGTGGTAC AATGATGTCT
CCCGAAGAAA AGAGAGCGCT TAATAAAATG AACCGCCAGG GTGTCAAAGA CCTCAACCTG
CAATGGATGA ATGAAATGGT GCAGAGTGAG CATCCGCTAC GTGAGAAAAT GGCGCTTTTC
TGGCATGGCC ATTTTGCCTG CCGCACACAG AATGTACTGT TCAACCAGCA GTTACTACAG
GTAATAAGGG AAAATGCACT GGGTAATTTC GGTGAATTGC TGACAGCTGT TTCCAAGTCG
CCCGCTATGC TGCAGTTCCT CAATAATCAG CAGAACGTGA AAGCACATCC GAATGAAAAT
TTCGCCCGCG AAGTCATGGA GCTTTTCACA ATGGGAAGAG GACATTACGC TGAAACGGAT
ATCAAAGAAG CCGCCAGAGC ATTTACAGGC TGGGCATATG AAGGAGATGG CAGCTTTGTG
TTCAGAGAGA AAAGACATGA CAACGGACAA AAAACAGTAT TGGGAAAGAG CGGCAATTTC
ACCGGGGATG ATGTACTGAA AATACTGCTG GAACGGAAAG AAACAGCCAG GTATATCACA
GAGAAAATAT ATCGCTACTT CGTCAGTGAA AACCTGGACG AAATAAATGT GAACAAACTG
GCAGATAAGT TTTATGCTTC CGGTTATGAT ATCGGTGCAT TGATGCAATA CCTCTTCAAT
GCGGACTGGT TTTATGACGC TACGCTGATT GGTACCCGTA TAAAATCACC GGTGGAATTG
CTCGTTGGAT TACGTAGGAC CGTACCCGTT GATTTCGAAA GAGAAGAGGT GATGTTGTCT
TTTCAGCAGG TATTAGGACA GGTCTTATTC TATCCTCCCA ATGTAGCCGG ATGGCCGGGC
GGACGTAACT GGATCGATAG TTCCAGTCTG ATGTACCGTA TGCAGTTACC CAAAATGATC
CTCTATGAAA AAGAGTTCAA TATCACACCC AAGGAAATCA CACCTGAAAT GGGGATGGGT
AGTTATAAAG TGACGATGGA GCTGAATGAA TCTGTGCAGA AACAGTATGC GAAAAAGATT
AAAGGTGTGA TCAACTGGAA TGCGTTATTG AAAGACTATG AAAAAGTACC ACGTGAAAAA
CTGGCGGATG CTATCGCCGG TTCATTGTTA CAGGCAAATA AAAACGTCAG TAAGCAGGTA
CTGGAAAACT ATGCAGATGC CTCCTCTCGC GAAAACTATA TTAAAACCGT TGCAATTGCA
GTAATGAGCA CACCGGAATA TCAGTTGTGC TGA
|
|---|
| Protein sequence | MQHLAWRAGF GASPAIIDEW THKKRRQVIS KILAGPEKDA QTPLKVRDAS DLPDRGTMMS
PEEKRALNKM NRQGVKDLNL QWMNEMVQSE HPLREKMALF WHGHFACRTQ NVLFNQQLLQ
VIRENALGNF GELLTAVSKS PAMLQFLNNQ QNVKAHPNEN FAREVMELFT MGRGHYAETD
IKEAARAFTG WAYEGDGSFV FREKRHDNGQ KTVLGKSGNF TGDDVLKILL ERKETARYIT
EKIYRYFVSE NLDEINVNKL ADKFYASGYD IGALMQYLFN ADWFYDATLI GTRIKSPVEL
LVGLRRTVPV DFEREEVMLS FQQVLGQVLF YPPNVAGWPG GRNWIDSSSL MYRMQLPKMI
LYEKEFNITP KEITPEMGMG SYKVTMELNE SVQKQYAKKI KGVINWNALL KDYEKVPREK
LADAIAGSLL QANKNVSKQV LENYADASSR ENYIKTVAIA VMSTPEYQLC
|
|---|
| |