Gene Cpin_0145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0145 
Symbol 
ID8356244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp177308 
End bp178621 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content43% 
IMG OID644962289 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003119849 
Protein GI256419196 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAAG TAATCTCCTG GAAAAAGAGG GCCAGAAGCC GTATTGCATT TCTACTGAAG 
CTCCTGTTGA CACTGATTGT ATTGATAATT CTCTATGGTC TCTGCATCGT CTTTACAAAC
GGCGTCAGCG AGGGAAAACT GGCCGCTGGT ATCACCTTTC TTATCGTACT CACCACCGGC
TGGTTATTTC ACAGACTAAG ATGGCTATCT TCCCGAACAA GATTGTTCAC CTGCCTGTTT
GTCTTACTGA CATTTATAGT CTTTGTCGTT TATACAATTA TCCCCGTTGC ATCAGATGAG
GCCATAAAAA TGCCCGCTGA TTTACCCGGT GTCACTACAA AATACTGGTT GCTAAAGACG
GGTAGCAAGA TTGCCTATTA TCAGTTCAAT GCGCAACCTG GTGTCGCCAA GAAAGAGACG
CCCATTATCT TTATTCATGG TGGTCCTGGG GCTTATGTAA GACAACTGGA ACTCGACTTC
TTCTCCACAT TTACAGCAGA AGGTTACGAT GTCTACCTGT ATGATCAGGT AGGAGCGGGC
AGAAGCGGAC AACTACCTAA ATCAGCATAT TCACATAAAC GGAATATTCA GGACTTTGAA
GCGATCCTGA ATAAGATTAA TGCACGGCAA TATATTGTGA TCGGACAATC TTATGGCGCA
TCCATGCTTG CTCAACTGAC GGCTAACGCC GTTATCGCCA AAAGGATAGC AAAAGCGATT
ATTATAGAAC CAGGTACTAC CGTAAAGGAA GCAGAGCACC CTGTATATCC CAAATCACCC
AATGCACTGA AAGACAATGT CGATATGCCC TTCAGGATAT TTCTGGGATT CGTGGTAAAT
CCAACAGGAG AATTCACTCC ACAAAACGAG GTTATTAACT ATTTCGCTGC GCATACAGAC
CTTACACAAA AAATCTTCCG TAATTCATTC CCGGCGGCCG ACAGCAATCA AATACCAAAA
GTTGATATCA GTGTCATCAA CTTTTCGATA GTAGGGATCA TTCCGCAACA GGTGCCATCG
TATGATAAGC ATCTTGTGGA AGACTATAAA CAAGTACATG TACCAACCAT GCTGATGCTC
GGCGAAAGCT CTTATATTGA AAGGAATGCG CCTATGGATC TATTGGCTAT TAATCCGAAT
ATCACACGTA GCCAATACAT CAAAAATGCA GGACATATCC TCTGGAATGG GCTGCATAAC
AACAACCAGA TTGTAAAACG GTCTATGCTG GAATTTCTGA ATGATCTGCC ACCCACCCTA
CCAGACTATC CCAAGCAAAG AGATATCAAA AATTTTCTCG AAAACAGATT GTAA
 
Protein sequence
MTQVISWKKR ARSRIAFLLK LLLTLIVLII LYGLCIVFTN GVSEGKLAAG ITFLIVLTTG 
WLFHRLRWLS SRTRLFTCLF VLLTFIVFVV YTIIPVASDE AIKMPADLPG VTTKYWLLKT
GSKIAYYQFN AQPGVAKKET PIIFIHGGPG AYVRQLELDF FSTFTAEGYD VYLYDQVGAG
RSGQLPKSAY SHKRNIQDFE AILNKINARQ YIVIGQSYGA SMLAQLTANA VIAKRIAKAI
IIEPGTTVKE AEHPVYPKSP NALKDNVDMP FRIFLGFVVN PTGEFTPQNE VINYFAAHTD
LTQKIFRNSF PAADSNQIPK VDISVINFSI VGIIPQQVPS YDKHLVEDYK QVHVPTMLML
GESSYIERNA PMDLLAINPN ITRSQYIKNA GHILWNGLHN NNQIVKRSML EFLNDLPPTL
PDYPKQRDIK NFLENRL