Gene Cpin_0076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0076 
Symbol 
ID8356173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp89881 
End bp90810 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content50% 
IMG OID644962221 
ProductADP-ribosylation/Crystallin J1 
Protein accessionYP_003119783 
Protein GI256419130 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1397] ADP-ribosylglycohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTACA AAGATTATAT CAAAGACGCC CTCCTAGGTG TCGCTACCGG TGATGCCTTA 
GGTGTACCGG TAGAATTCCG GTCACGGCGC TCCCTATTAG AAAACCCGGT CACCAATATG
CGGAGCTATG GTACGCACGG TCAACCGGCA GGTACCTGGT CAGATGATAG CTCGCTGACC
TTCTGTCTCG CAGAAATGCT CTGCGGCGAT TACGACCTGC AAAACCTGGC CAACCGTTTC
GTGAATTGGA TGCAGCATGG CTATTGGACA CCACATGGCG AAGTATTTGA CATTGGTTTT
GCTACCCGCG ACGCCATCCT TAACCTGGGC CGGGGTGTCT CTCCTGTAAT GGCAGGTGGT
ATCCACGAAC AAAGTAACGG TAACGGATCT CTCATGCGTA TTCTTCCTTT GGTATTTTAT
ATCAAAGACA TGTCGATAGA AGAGCGGTAC CGACACACAC AGGAAGTATC CTCACTGACA
CACAGGCATC AACGCTCCAT TAACGGGTGT TTTATTTACC TTGAAATGGC ACGGGCCATC
TTACAGGGAC AAACACCTGA ACAGGCATAT CAGACGATCT GTGACACCAT TCCGCCGTTC
CTCAAAAACG ACGAGATATA TTACTATGAC CGCGTACTGT TCGGCCATCT ACGGGATTGT
GCCGACACTG ATATCCGGGG TGGCGGCTAT GTCGTACACT CGCTGGAAGC AGCTGTCTGG
TGTCTTTTAC ATACCAGCTC TTATGCGGAC GCCGTCCTGA CTGCTGTCAA CCTGGGAGAA
GATACAGACA CAACAGGTGC TGTTACCGGC GGACTGGCAG GATTGACCTA CGGATGGGCC
ACAATTCCGG CGGACTGGCT AAATGTTTTG GCAAAAAGGG ATGCAATTGA CGTACTGATT
ACTAACTTGC AGGCCAAAAT TTACAGGTAA
 
Protein sequence
MSYKDYIKDA LLGVATGDAL GVPVEFRSRR SLLENPVTNM RSYGTHGQPA GTWSDDSSLT 
FCLAEMLCGD YDLQNLANRF VNWMQHGYWT PHGEVFDIGF ATRDAILNLG RGVSPVMAGG
IHEQSNGNGS LMRILPLVFY IKDMSIEERY RHTQEVSSLT HRHQRSINGC FIYLEMARAI
LQGQTPEQAY QTICDTIPPF LKNDEIYYYD RVLFGHLRDC ADTDIRGGGY VVHSLEAAVW
CLLHTSSYAD AVLTAVNLGE DTDTTGAVTG GLAGLTYGWA TIPADWLNVL AKRDAIDVLI
TNLQAKIYR