Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0050 |
Symbol | |
ID | 8356147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 59934 |
End bp | 60914 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644962195 |
Product | hypothetical protein |
Protein accession | YP_003119757 |
Protein GI | 256419104 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGCAT TTTCACATGG AGATGCGAGG TTGCTTCCAT TGGAAGGAAA GCGTATTGGT AATACGAATA CCGCCCGAAT ACCCGAAGAG TATCTTCAAT TATTATTGCC CTACGCCAAT GTACACTGTT GGCAGAATGG CCAGGTGTAT GTATTGTCCC AGCATATGTT ACTGGGGGCC TACTCCCTAT GGATCCATGA TGTTGTAGCA GATGGGGCGC AAGACATTCT TCCCTATGTG CCGCACCCGC TTTACACACT ACATTATATG TTTGAAAGCG GACTGGACGT AAGAACGCCG GATGCGGAAC CGTTCCACCT GGAAGAAGAC ACCTGTAATC TCTTTTATCT TGAACCAGGC GTAAGCCGGC TGCCTTTGGA AGAAGATCTG AAGGCATTAT CCGTATTAAT CAACATATTA CCCGAACATA TATCCGCGCT GACAAAAGAC TTTCCGGATC TCCACAAACG ACTGCAGCAA CATCGCTTAG GTAACCAGGT GATCAACAAA CAACCGTTTA CCGTAACAAC TGTCAACCGG ATGCTGATCT CCAGAATACT GACCTGCCGT TATCTCCGGG ATGACGCCGC TGTATTCCTG GAAAGATGCT GCGCCGATCT CTTCCGTATA TTTTGTCGCC AGTATAATGT GGCCATGGTC GTTCCTCCAG CAGAAAACGA CAACTACAAT AAAGTCTTCG AATACATGCG GACATACCCT CATGCCCGCT GTGACCTGAG ATATTTTTCC CGGATGTTCC ACATACCAGA ACATGAGATG GAAGCAGGCT TCCTGAGCTA TTTTGCCATC AGCATACATG ATTGCAGTCA TATGCTGAAG ATGATGACCG CCTTTGATCT GATTATACAA CATGGTCAAT CCTTTGGTGA TATCGCAGTG CGGATTGGAA TGGACACGGA AAGGATGATT CAAGCGATAG AAGCATATTA TAATATCAAA GTTGCTGCGC AAAGAAACTA A
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Protein sequence | MSAFSHGDAR LLPLEGKRIG NTNTARIPEE YLQLLLPYAN VHCWQNGQVY VLSQHMLLGA YSLWIHDVVA DGAQDILPYV PHPLYTLHYM FESGLDVRTP DAEPFHLEED TCNLFYLEPG VSRLPLEEDL KALSVLINIL PEHISALTKD FPDLHKRLQQ HRLGNQVINK QPFTVTTVNR MLISRILTCR YLRDDAAVFL ERCCADLFRI FCRQYNVAMV VPPAENDNYN KVFEYMRTYP HARCDLRYFS RMFHIPEHEM EAGFLSYFAI SIHDCSHMLK MMTAFDLIIQ HGQSFGDIAV RIGMDTERMI QAIEAYYNIK VAAQRN
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