Gene Cpin_0048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0048 
Symbol 
ID8356145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp57767 
End bp58258 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content44% 
IMG OID644962193 
Producthypothetical protein 
Protein accessionYP_003119755 
Protein GI256419102 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGC TACTCCTTTT GTTTGCCCTG GGACTCGCCA GCTGTACTCC TGCTCCTCAT 
GCCGACGATA TGCCCAAAGA TCCCAAAGCC TTACCTCCCA TTGTGTTGTT AAAGGGAGAT
ACGGTGTCGA AGTTCAGTAC TGACAGTCTG GCGAAAGGAC GCCCTACCTT GTTGTATTAT
TACGGCCCTG GTTGTTTGCC TTGTGACACT TTCACACAGA AAATGATAGC AGCGATGGAT
ACGTTGAAGG ATATTAACCT TTTGTTCATC AGTGCTGGTA GTTTTCATGA TGTGAAATTG
TACCAGGAGA AGTATAACGT GGAAAAATTC CCGAATGTGA AACTGGGGTT AGATTATAAT
AATACGTTCT TCCGCTATTA TGGCGGACAG GCATATCCGC TGCTTGTATT TTATGATAAA
AACAGACAGA TTAAACGTGC GAATTTAGGA TCGTTGCCAT TGGATACGGT CCGTGCGATC
ATTGATATGT AG
 
Protein sequence
MKQLLLLFAL GLASCTPAPH ADDMPKDPKA LPPIVLLKGD TVSKFSTDSL AKGRPTLLYY 
YGPGCLPCDT FTQKMIAAMD TLKDINLLFI SAGSFHDVKL YQEKYNVEKF PNVKLGLDYN
NTFFRYYGGQ AYPLLVFYDK NRQIKRANLG SLPLDTVRAI IDM