Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_3939 |
Symbol | |
ID | 5744690 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 4839020 |
End bp | 4839748 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 641295056 |
Product | methyltransferase GidB |
Protein accession | YP_001561025 |
Protein GI | 160882057 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.84528 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGATA ATTCGACTTT CATTCAAGGG CTACGTAGTC TTGGAATGGA TTTAAATAAA CATCAGTTAG AGCAATTTGA GATATATTAT GATTTGTTAA TCGAATGGAA TTCTTTTATG AATTTAACTG CAATTACAGA ATATGAAGAA GTAATACAAA AACATTTTCT TGATAGTCTG TCACTTATAA AATCATATCA AATTAAGACA GGAGATACGT TACTAGACAT GGGTACGGGA GCAGGTTTTC CTGGAATACC ATTAAAAATT GCATATCCTG ATTTAAATGT ATTGCTAATG GACTCTTTAA ACAAAAGGAT TAACTTTCTA AATGAGGTTA TCAATAGGTT AGAACTAAAG AATATATCTG CAATGCATGG TAGAGCGGAA GAACAAGCAA GAAAGCTTGA TTTTCGTGAG AAATTTGATA TAGTTGTATC AAGAGCTGTA GCAAGAACAG CTTCTTTGGC AGAATTATGT TTACCCTATG TGAAAAAGGG AGGATACTTT ATTCCTTATA AATCAGGAAA GGTTACTGAG GAGTTAGAGG AAGCAGAATA TGCCTTAGAA TGCTTAGGTG GTAAGTTAGA AGAAAAGGTT ACATTCTCCT TACCAGATAC AGATATGGAA CGAACTTTAA TATGTATTAA AAAAGTAAAA GAAACTCCGA AGTCTTATCC AAGAGCCGGA GGGAAACCTT TAAAAATGCC TTTAATAAGA AAAAAATAA
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Protein sequence | MRDNSTFIQG LRSLGMDLNK HQLEQFEIYY DLLIEWNSFM NLTAITEYEE VIQKHFLDSL SLIKSYQIKT GDTLLDMGTG AGFPGIPLKI AYPDLNVLLM DSLNKRINFL NEVINRLELK NISAMHGRAE EQARKLDFRE KFDIVVSRAV ARTASLAELC LPYVKKGGYF IPYKSGKVTE ELEEAEYALE CLGGKLEEKV TFSLPDTDME RTLICIKKVK ETPKSYPRAG GKPLKMPLIR KK
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