Gene Cphy_3939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3939 
Symbol 
ID5744690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp4839020 
End bp4839748 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content32% 
IMG OID641295056 
Productmethyltransferase GidB 
Protein accessionYP_001561025 
Protein GI160882057 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division 
TIGRFAM ID[TIGR00138] 16S rRNA methyltransferase GidB 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.84528 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGATA ATTCGACTTT CATTCAAGGG CTACGTAGTC TTGGAATGGA TTTAAATAAA 
CATCAGTTAG AGCAATTTGA GATATATTAT GATTTGTTAA TCGAATGGAA TTCTTTTATG
AATTTAACTG CAATTACAGA ATATGAAGAA GTAATACAAA AACATTTTCT TGATAGTCTG
TCACTTATAA AATCATATCA AATTAAGACA GGAGATACGT TACTAGACAT GGGTACGGGA
GCAGGTTTTC CTGGAATACC ATTAAAAATT GCATATCCTG ATTTAAATGT ATTGCTAATG
GACTCTTTAA ACAAAAGGAT TAACTTTCTA AATGAGGTTA TCAATAGGTT AGAACTAAAG
AATATATCTG CAATGCATGG TAGAGCGGAA GAACAAGCAA GAAAGCTTGA TTTTCGTGAG
AAATTTGATA TAGTTGTATC AAGAGCTGTA GCAAGAACAG CTTCTTTGGC AGAATTATGT
TTACCCTATG TGAAAAAGGG AGGATACTTT ATTCCTTATA AATCAGGAAA GGTTACTGAG
GAGTTAGAGG AAGCAGAATA TGCCTTAGAA TGCTTAGGTG GTAAGTTAGA AGAAAAGGTT
ACATTCTCCT TACCAGATAC AGATATGGAA CGAACTTTAA TATGTATTAA AAAAGTAAAA
GAAACTCCGA AGTCTTATCC AAGAGCCGGA GGGAAACCTT TAAAAATGCC TTTAATAAGA
AAAAAATAA
 
Protein sequence
MRDNSTFIQG LRSLGMDLNK HQLEQFEIYY DLLIEWNSFM NLTAITEYEE VIQKHFLDSL 
SLIKSYQIKT GDTLLDMGTG AGFPGIPLKI AYPDLNVLLM DSLNKRINFL NEVINRLELK
NISAMHGRAE EQARKLDFRE KFDIVVSRAV ARTASLAELC LPYVKKGGYF IPYKSGKVTE
ELEEAEYALE CLGGKLEEKV TFSLPDTDME RTLICIKKVK ETPKSYPRAG GKPLKMPLIR
KK