Gene Cphy_3884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3884 
Symbol 
ID5742281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp4772764 
End bp4773486 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content37% 
IMG OID641294997 
ProductABC transporter related 
Protein accessionYP_001560970 
Protein GI160882002 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGAGG TAAATCACGT ACATAAGGCT TATCAAAATC ATACTGCTGT AGAGGACATT 
AGTTTTCAGA TGAAGCAGGG CGAAATTACA GGTTTAATTG GTCCAAACGG TGCGGGAAAA
TCAACGACAG TATCGATGAT CGCAACCTTA CTTCGACCGG ACAAAGGGCA GATTCTTTTC
AATGGAGAGG ATATTGCAAA AAACCCTAAA ATAATCCGAA GTTCCTTGGG ATACGTACCT
CAAGACATTG CACTCTACGA GTCACTTACT GGAATGGATA ATTTTGAATT TTGGGGAAAT
GCCTATCATT TATCAAAAGC ACTGAAGAAA GAACGAATAA AACAATTGAG TGATATGATA
GGTTTTACCG AGAGTGAGTT AAATCGAAAA GTGAAAGAGT ACTCCGGTGG TATGAAAAGA
AGATTAAATA TTGCGGTAGC ACTGCTACAT GAACCCCAAT TAGTAATCTT AGATGAGCCA
ACCGTTGGGA TTGACTTACA ATCGAGAAAA CAGATTTTAT CTGCTATTGA ACAGTTAAAG
AAGGCTGGAA CTGCTATTTT ATATGTAGGT CATTATTTAG AAGAAGTAGA ACGCTTGTGT
GACCGAATTC TTATTTTCAA TCAGGGAAGA TGTGTATGGA ATGATACCGT ATCAAATTCT
CTAATCCAAA GTGGTAATAA AATATCCTTA GAGCAGCTCT ATGAGGAATT AAGTATTAAT
TAA
 
Protein sequence
MLEVNHVHKA YQNHTAVEDI SFQMKQGEIT GLIGPNGAGK STTVSMIATL LRPDKGQILF 
NGEDIAKNPK IIRSSLGYVP QDIALYESLT GMDNFEFWGN AYHLSKALKK ERIKQLSDMI
GFTESELNRK VKEYSGGMKR RLNIAVALLH EPQLVILDEP TVGIDLQSRK QILSAIEQLK
KAGTAILYVG HYLEEVERLC DRILIFNQGR CVWNDTVSNS LIQSGNKISL EQLYEELSIN