Gene Cphy_3849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3849 
Symbol 
ID5744801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp4713700 
End bp4714179 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content35% 
IMG OID641294961 
Producthypothetical protein 
Protein accessionYP_001560935 
Protein GI160881967 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1516] Flagellin-specific chaperone FliS 
TIGRFAM ID[TIGR00208] flagellar biosynthetic protein FliS 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAGG ATCGATTACG AGAGTTCGCT GTTAGAGTCA CACAAGCAAA CCAAAGCCAA 
CTAATTGTTA TTCTCTATGA CATTTTAGAG GCAGACTTAG AATGTGCGAC AGATGCAATT
AACGCGAAGG ATTATAAAAT ATACGAAAAA GAATTAAGAC ATGCAAGTCG TGTTATAAAT
CAACTCATGG GTGCCTTAGA TTATCGCTAT CCACTATCAT ACGATTTACT AAGTCTATAT
TCTTACTTAA ATAAAAAGCT GGTTTGTGCC CAAATGTCAC GAAGTAATCA AGACTTTCCA
GAGATCCTTG ATCTAATAAA TGACTTAAGA GTTGGTTTTT TAGAAGTGAG TAAACAAGAT
AACTCAGGAC CAATGATGCA AAACACACAG CAGATTTATG CAGGATTAAC CTATGGCAAA
GGTACTTTAA ATGAATCAAG TTTAAATCCA AGTGATATTA ATCGTGGGTT TAAGGCTTAA
 
Protein sequence
MNKDRLREFA VRVTQANQSQ LIVILYDILE ADLECATDAI NAKDYKIYEK ELRHASRVIN 
QLMGALDYRY PLSYDLLSLY SYLNKKLVCA QMSRSNQDFP EILDLINDLR VGFLEVSKQD
NSGPMMQNTQ QIYAGLTYGK GTLNESSLNP SDINRGFKA