Gene Cphy_3832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3832 
SymbolileS 
ID5744784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp4692224 
End bp4695499 
Gene Length3276 bp 
Protein Length1091 aa 
Translation table11 
GC content38% 
IMG OID641294944 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_001560918 
Protein GI160881950 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACGAAA AGGTATCAAC CAATCTGAAT TTTGTTGACA GAGAAAAAGA AGTATTGAAG 
TTCTGGAAAG AGAATGAAAT CTTTGAGAAA AGTATTGATT CCAGAAAAGA AGGAGAGACA
TTTACGTTTT ATGATGGACC TCCAACTGCA AATGGTAAAC CACACATTGG ACACGTATTA
ACACGTGTTA TTAAAGATAT GATTCCAAGA TACCGTACTA TGAAGGGTTG TATGGTTCCA
AGAAAGGCTG GATGGGATAC TCATGGTCTT CCAGTAGAGC TTGAAGTTGA GAAGCTTCTA
GAATTAAATG GTAAAGAGCA GATTGAACAG TATGGTTTAG AGCCATTTAT TACAAAGTGT
AAGGAAAGTG TTTGGAAATA CAAAGGGATG TGGGAAGATT TCTCTGGTAC CGTTGGTTTC
TGGGCAGATA TGGATGATCC ATATGTAACT TACCATAACG ATTATATTGA ATCTGTATGG
TGGTCCTTGA AGCAAGTCTG GGATAAGGGC TTATTATACA AAGGTTATAA AATTGTACCT
TACTGTCCAA GATGTGGAAC ACCTCTTGCT TCTCATGAGG TAGCACAAGG ATATAAGGAT
GTAAAGGAGA AATCCGTTAT CGCTAAATTT AGAGTAATGG ATTCTGCAAA TGAGTATTTC
TTAGCATGGA CAACAACACC TTGGACACTT CCATCTAACG TAGCGCTTTG TGTTAATCCA
AAGGAAGACT ATGTGAAGGT AGAAGTTTCA GTAAATGCGA AAGGTAATGT CGTAAAGAGC
CCTAAGGGTG AGGAAGAAGT TACTGAGGAA CATACAGCAG TCGGTGTAGA GTACTATATC
TTAGCAGAAG CATTATGCTC CGTCATTGAA GGAGATTATA GAGTAGTTGA GAGTTACAAA
GGATCTGATC TTGAGTATAT GAAATATGAT CCACTATTTG ACTATGCATA TAATAATGCG
GATGGAACTA GAAATGAAAA AGCAAACCGT AACAATGTCA ATGGCAAGAA GGCTTATTAT
GTAACTTGTG CTGACTATGT TACATTAACG GATGGTACTG GTATCGTTCA TATTGCTCCA
GCCTTTGGTG CAGACGATGC GAATGTAGGT AATCGTTATG AATTACCTTT CGTACAGTTA
GTGGATGAAA AAGGTCAGAT GAAGGCAGAG GTTACCGATT TCGCAGGACT ATTCTGCAAG
AAGAGTGATG AAGGAATCCT TAAGAAATTA GGAGAAACAA AGCAATTATT TAAGGTTCTT
AAATTTGAGC ATAGTTATCC ATTCTGCTGG AGATGTGATA CTCCTCTGAT CTACTATGCA
AGAGAGTCCT GGTTCATCAA GATGACAGCT GTGAAAGACA AGATGATTGC AAACAATAAT
ACAATCAACT GGATTCCTGA GACCATAGGT AAAGGACGTT TTGGTGACTG GTTAGAGAAT
CTTCAGGATT GGGGTATCAG CCGTAATCGT TACTGGGGAA CTCCATTAAA TGTTTGGACT
TGTGATTGTG GCAAGATGCA TTCGATTGGA AGCATTGAAG AATTAAAGTC TATGTCTAAG
AATTGTCCAG AGGATATCGA GCTTCACAGA CCGTACATTG ATAACGTAAC AATTACCTGT
CCTGATTGTG GCAAGGAAAT GCATCGTGTA CCTGAAGTTA TTGACTGTTG GTATGATTCT
GGTGCAATGC CATTTGCACA GCATCATTAT CCATTTGAAA ATAAAGAGAA GTTCGAAGCA
CAGTTCCCAG CAGATTTTAT CTCTGAAGCT GTTGACCAGA CGAGAGGTTG GTTCTACTCC
TTACTTGCAA TTTCAACACT TATCTTTGAT AAAGCTCCAT ATAAGAATGT TATCGTTCTT
GGGCACGTTC AGGATGAGAA TGGTCAGAAG ATGAGTAAAT CTAAAGGAAA TGCAGTAGAT
CCGTTTGATG CGTTAGAGGA ATATGGCGCA GATGCGATTC GTTGGTACTT CTATATTAAC
TCAGCTCCTT GGTTACCAAA CCGTTTTCAT GGAAAGGCAG TAGTAGAAGG ACAGCGTAAG
TTCATGGGTA CTCTATGGAA TACCTATGCA TTCTTCGTAC TATATGCAAA CATTGACCAA
TTTGATGCAA CCAAATATTC TTTAGATTAT GATAAACTTC CAGTTATGGA TAAATGGTTA
CTTAGTAAGT TAAACACAGT GGTTAAGACT GTGGATGAAA ACCTTGCTGC TTATAAGATT
CCTGAGACTG CTAGAGCACT TCAGGAGTTC GTAGATGAGC TAAGTAACTG GTATGTAAGA
CGTGGTCGTG AACGTTTCTG GGCAAAGGGA ATGGAGCAGG ATAAGATTAA TGCTTACATG
ACGTTATACA CTGCATTAGT AACGATTGCA AAGGCTTCTG CGCCTATGGT TCCATTCATG
GCAGAAGATA TCTACCGTAA CCTTGTATGC AGTATCGATA AGAACGCACC ATTAAGCGTC
CACCTATGTG ATTTCCCAAC CTGGGATGCG AAGTTAATTG ATACTAAGCT TGAGGCAGAT
ATGGAAGCAG TTCTTGAGAT CGTAGTTCTT GGCCGTGCAT GTAGAAATAC AGCAAACATT
AAGCAGAGAC AGCCAATTTC TAAGATGTAT GTAAAAGCAG AGTTAACTTA TACAGCAAAC
GATGGTAGCG TAGTAGAAGG AATGTCTGAC TTCTATAAGG AAATTATTGA AGATGAGTTG
AATGTAAAGA ATGTAGTATT TACTTCTGAT GTTCGTAACT TTACTTCTTA TACATTTAAG
CCACAGCTTA AGACTCTTGG TCGCCGTTTT GGTAGTAAGT TAAATGCGTT AAAAGAAGTA
TTATCTTCTT TAAACGGTAA TGAAACGATG GATGAATTAA ATGAGAAGGG AACTCTTACA
ATTACTTTAG ATGGTACAGA AGAAGTTCTT GAAAAGGATG ACCTTTTAAT TGATGCAGCT
CAGATGGAAG GCTATGTAAC AGATAGTGAC TATGGAATTA CTGTAGTTCT TGATACAAAT
CTAACAGAGG AGTTAATCGA AGAGGGATTT GTACGTGAAG TAATTAGTAA GGTTCAGACA
ATGCGTAAAG ATGCCGGATT CGAAGTAATG GATCATATTG TGGTATCTGT TAAGGATAAT
GAAAAGGTAG AAGCAATTGT GAAGAAAAAT GTTGCTGAAA TCTCTTCTAT CGTTCTTGCA
GATGATGTGG TTTATGGAGA AGCTCAGGGC TTTAGCAAAG AGTGGAACTT AAATGGTGAG
GATGTAACTC TTGGCGTTAT GAAAGTGAAT GCTTAA
 
Protein sequence
MYEKVSTNLN FVDREKEVLK FWKENEIFEK SIDSRKEGET FTFYDGPPTA NGKPHIGHVL 
TRVIKDMIPR YRTMKGCMVP RKAGWDTHGL PVELEVEKLL ELNGKEQIEQ YGLEPFITKC
KESVWKYKGM WEDFSGTVGF WADMDDPYVT YHNDYIESVW WSLKQVWDKG LLYKGYKIVP
YCPRCGTPLA SHEVAQGYKD VKEKSVIAKF RVMDSANEYF LAWTTTPWTL PSNVALCVNP
KEDYVKVEVS VNAKGNVVKS PKGEEEVTEE HTAVGVEYYI LAEALCSVIE GDYRVVESYK
GSDLEYMKYD PLFDYAYNNA DGTRNEKANR NNVNGKKAYY VTCADYVTLT DGTGIVHIAP
AFGADDANVG NRYELPFVQL VDEKGQMKAE VTDFAGLFCK KSDEGILKKL GETKQLFKVL
KFEHSYPFCW RCDTPLIYYA RESWFIKMTA VKDKMIANNN TINWIPETIG KGRFGDWLEN
LQDWGISRNR YWGTPLNVWT CDCGKMHSIG SIEELKSMSK NCPEDIELHR PYIDNVTITC
PDCGKEMHRV PEVIDCWYDS GAMPFAQHHY PFENKEKFEA QFPADFISEA VDQTRGWFYS
LLAISTLIFD KAPYKNVIVL GHVQDENGQK MSKSKGNAVD PFDALEEYGA DAIRWYFYIN
SAPWLPNRFH GKAVVEGQRK FMGTLWNTYA FFVLYANIDQ FDATKYSLDY DKLPVMDKWL
LSKLNTVVKT VDENLAAYKI PETARALQEF VDELSNWYVR RGRERFWAKG MEQDKINAYM
TLYTALVTIA KASAPMVPFM AEDIYRNLVC SIDKNAPLSV HLCDFPTWDA KLIDTKLEAD
MEAVLEIVVL GRACRNTANI KQRQPISKMY VKAELTYTAN DGSVVEGMSD FYKEIIEDEL
NVKNVVFTSD VRNFTSYTFK PQLKTLGRRF GSKLNALKEV LSSLNGNETM DELNEKGTLT
ITLDGTEEVL EKDDLLIDAA QMEGYVTDSD YGITVVLDTN LTEELIEEGF VREVISKVQT
MRKDAGFEVM DHIVVSVKDN EKVEAIVKKN VAEISSIVLA DDVVYGEAQG FSKEWNLNGE
DVTLGVMKVN A