| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3716 |
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| Symbol | |
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| ID | 5742915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 4569180 |
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| End bp | 4570511 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 641294828 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_001560802 |
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| Protein GI | 160881834 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00102853 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGATTCG AATATGTACA TAATCAAGAT ATAGCTACGT TCAGCTTATT ATGGAAAGAT
GATGAATTAA TGCTAGCATA TTCTGATGAA CGTTTTTATA AGTTTCTTAA TATTCCCTTT
TCTCTTGATC CTCCTATACC ATTAAAAGAT TTCATCGAGG GACAAGATTA TGAGACGTTT
AAGGGAGCCA TTCGGAAACT AGGTTCTGAC TATAATACAT TTCGATGCTT TCATAAGGTA
AGGATAAAAG ATAAATTCTT ACCGTATGTT ATATCGGTAG TATCAGTACC ATATCTTGGA
GATAATTACT ACTTTTGTTT TGCTACATTA ATACATCTAC CAATGACACT AAAAAATTTA
GATTCATCTC ATAATCTAAA TTATGCTTTA TACAATTCTA CGAATGATCT CTTATTTACA
GTACAACTAC TTGATCCTAA GGAACTGCAG ATAACTACAT ACAATGCACC ATTTCTAGAC
TATCTTAAAA TTTCAAAAAT ACATGAAGAG AAAAAAAAAT TAAGCGAAAT TGTATCACCT
TATGTCTTTC ATTTCTTTCT GAACAATGTA ACACATGCAC TTGGATTTGG TAAGAGTTAT
CGTGCTACAC TTCACTACAC ATGTTCGCAA CAAGATTTTA TAAAATACAG CGTACCAAGT
AGTGGGGCTT ATCACCTCGA AGTCACTTTC GTTCCATTGC ATCAGCATAA TTATCAACGG
GTGCTTTGTT GCGCTAGGGA CATAACTGCT GAGGTTGAAG CGAAAAAGGT AGCTGCAGAT
TTGTTGGAAG AGTATAGTAC GCTTTTTCAC GCAACTACAA ACGCAGCTGC TGTATTAAGG
GTCGAATCAA AAGGAGCCGC TTCGATTGAG CGTATTAACC CCGTAATGAC TGAATTCCTA
CAAAAATACT CTGTATTTAG TGTATCTGCT TTGTTAGAAA GCAAACATTG GGTTAAACTT
TTTGAGAAAC GCACTACTTT AGAAGCTCCA GTAACTTTTC CTCTTGGCAG AATAAACTTT
TACTTTAAAT TAATTTTAAT ACCTATTTTA CGTCAAGAAC ACATACAGAA AGTGATTGTT
ATTATTGTAG ATAATACTGA ACAGGTTCGA TTAAATTCCG GAAGTAACGT GTCATTAACA
CCAAGAGAGA AGCAAATCAT CATCATGGCA GCAGAAGGTG AGAAAAATAG TTATATTGCT
TCGAAGCTTG GAATCACCGT TGGAACTGTA AAACGGACTC TTTCTAATGC ATATAACAAA
CTAAATATTA ATTCACGTGT AGAGTTGCTT CACTATTACT ATAATGAGCA ACTAGGGGGC
CCACATGTAT GA
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| Protein sequence | MRFEYVHNQD IATFSLLWKD DELMLAYSDE RFYKFLNIPF SLDPPIPLKD FIEGQDYETF
KGAIRKLGSD YNTFRCFHKV RIKDKFLPYV ISVVSVPYLG DNYYFCFATL IHLPMTLKNL
DSSHNLNYAL YNSTNDLLFT VQLLDPKELQ ITTYNAPFLD YLKISKIHEE KKKLSEIVSP
YVFHFFLNNV THALGFGKSY RATLHYTCSQ QDFIKYSVPS SGAYHLEVTF VPLHQHNYQR
VLCCARDITA EVEAKKVAAD LLEEYSTLFH ATTNAAAVLR VESKGAASIE RINPVMTEFL
QKYSVFSVSA LLESKHWVKL FEKRTTLEAP VTFPLGRINF YFKLILIPIL RQEHIQKVIV
IIVDNTEQVR LNSGSNVSLT PREKQIIIMA AEGEKNSYIA SKLGITVGTV KRTLSNAYNK
LNINSRVELL HYYYNEQLGG PHV
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