Gene Cphy_3632 details

Gene Information

• Locus tag: Cphy_3632
• ID: 5742656
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium phytofermentans ISDg
• Kingdom: Bacteria
• Replicon accession: NC_010001
• Strand: +
• Start bp: 4483225
• End bp: 4483908
• Gene Length: 684 bp
• Protein Length: 227 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 641294742
• Product: ABC transporter related
• Protein accession: YP_001560718
• Protein GI: 160881750
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.256668
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTCATC TTGATGATGT TACTCTAATT TATGATATTG ATAAAACAAA TAAGGTTTAT 
GCAATTAAAA ATATTACAAC TACATTTCCA GACCATGGTC TAATCGGTAT TATTGGACCA 
AGTGGAAGCG GCAAATCAAC TTTAATGTAC TGTATGTCCA CCTTAAAGAA GCCAACCTGT 
GGTGAGATCC TCTATCAGGA AAAGGATATT GCTATTTCCT ATACCAATAT GAGCAAGAAA 
GATCAGGAAC AACTTCGTAA AAGTAAATTC GGTTTCGTCT TCCAGAGACA TTTTTTAATT 
TCCTATATGA GTGCACTGGA AAATGTTATT GTTGCGGCGA ATTGCTCGAA AGGTGAAGCT 
ATGTCCCGTG CAAAGGAGTT GCTTCAAAAA CTTGGCATAA AACAATCTGA ATTTTCAAAA 
AAACCTCATC AATTATCCGG TGGTCAGCGT CAACGTATCG CAATTGCAAG GGCTATGCTA 
CACGAACCAA GTGTATTGTT TGCTGATGAA CCGACTGCTT CCTTAGATCA TACTACTGCA 
TTTGCAACTA TGGATTTACT TTTAGAATAC GCCAAGAAGC ATCTTGTACT TATTATTACT 
CATGATGGAT CCATCTTAAA AGACGCTGAT CAAATTATTG AAATCTGGGA TGGTAGTATT 
CTTGACAGGG AGGCAACCAT ATGA 

 

Protein sequence

MFHLDDVTLI YDIDKTNKVY AIKNITTTFP DHGLIGIIGP SGSGKSTLMY CMSTLKKPTC 
GEILYQEKDI AISYTNMSKK DQEQLRKSKF GFVFQRHFLI SYMSALENVI VAANCSKGEA 
MSRAKELLQK LGIKQSEFSK KPHQLSGGQR QRIAIARAML HEPSVLFADE PTASLDHTTA 
FATMDLLLEY AKKHLVLIIT HDGSILKDAD QIIEIWDGSI LDREATI