| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3520 |
|---|
| Symbol | |
|---|
| ID | 5743632 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 4348806 |
|---|
| End bp | 4349561 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 641294631 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001560608 |
|---|
| Protein GI | 160881640 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2384] Predicted SAM-dependent methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTTAT CAAAAAGATT ACGTATGGTG GCTGATAGCG TCACAAAAGG AAATGTGGTT
GCAGATGTAG GCTGTGATCA CGCCTACATT TCCATATATC TTGTAGAAGG AAAGATTGCT
CCTAAAACGA TAGCTCTTGA TGTAAATGAG GGTCCGCTGC TGCGGGCGCA GGAAAACATC
ATAAGCTATG GGATGGAGAA TCTGATAACG ACAAGGTTAT CCGATGGATT GCACATGCTA
AAACCAAATG AGGTAGATTC GATTGTCATC GCTGGCATGG GTGGAGCCCT TATGATTAGA
ATATTAGAAG AAGGCAGCGA GTGCGTAGCG GCGGCAAAGG AACTTATCTT ACAGCCACAG
TCAGAAATCT GGAGGGTACG AGAGTATCTA CATAATCTGA ACTTCGAAAT TACAAAAGAG
GATATGTGTA TTGATGAAGG TAAGTATTAT ACAGTACTTT ATGCGCAGCC CCAATCACGG
GGCTGTACTT CATTGCTCCA AGAAAACCGG GACAGCTTCT GCGAAGAGAG GGAAGTCACG
AAGGATGCCG AAGAGTTATA TAATAGGTAT GGGAGATATC TCTTAGAGAA TAAACATCCA
GTACTACAGC AGTTTCTTGA GAAAGAAAGA GCGAAAGCTT ATCAAATTAG AGAAAATTTA
GAAAGCATTA GTACTCTTAA AAATAGAGAG AGATATGCAG AACTTTTAAA GGAAATAGAA
ATGTTAGAGG ATGCGTTACA ATACTATAGA TCTTAG
|
|---|
| Protein sequence | MNLSKRLRMV ADSVTKGNVV ADVGCDHAYI SIYLVEGKIA PKTIALDVNE GPLLRAQENI
ISYGMENLIT TRLSDGLHML KPNEVDSIVI AGMGGALMIR ILEEGSECVA AAKELILQPQ
SEIWRVREYL HNLNFEITKE DMCIDEGKYY TVLYAQPQSR GCTSLLQENR DSFCEEREVT
KDAEELYNRY GRYLLENKHP VLQQFLEKER AKAYQIRENL ESISTLKNRE RYAELLKEIE
MLEDALQYYR S
|
|---|
| |