| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3426 |
|---|
| Symbol | |
|---|
| ID | 5743537 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 4211213 |
|---|
| End bp | 4213156 |
|---|
| Gene Length | 1944 bp |
|---|
| Protein Length | 647 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641294538 |
|---|
| Product | NAD+ synthetase |
|---|
| Protein accession | YP_001560518 |
|---|
| Protein GI | 160881550 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0171] NAD synthase
[COG0388] Predicted amidohydrolase |
|---|
| TIGRFAM ID | [TIGR00552] NAD+ synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGACACG GATTCGTAAA AGTAGCGGCT ATTACACCAA ATATTAAAGT TGCTGATTGT
GAATATAACG TAAATGAAAT AATCCATCAA ATAGAAGAAG CAAAACAAAA GGGTGCAAAG
GTAATAGTAT GTCCGGAACT ATGTATTACT GGATATACCT GTGAGGATTT GTTTTTACAG
AATACCTTAC TAAATGGGGC GCTGGATGGA CTTAATAAAC TAATCGATTA TAGTAAGGAT
ATTGATGCTC TTATCGCTGT TGGGCTCCCT TTTTTAAAGG ATGGTAAGTT ATTTAATGTT
GCAGTAGTAC TTTATCAGGG AGAATTACTT GGTATGGTAC CAAAAAGAAA TATCCCTAAC
TATTCTGAAT TCTATGAAGC ACGTTATTTT GGAAATGGAA ATGATATTGT AGAGCATGTA
ACAATAAATC ATAAAAAAGT GCCATTTGGC AGTAATTTAA TCTTTTGTCA TAGAGAAATC
CCTTATCTAA AAGTAGGAAT AGAAATTTGT GAAGATTTAT GGGTGCCACA GCCACCGAGC
GGAGGGTTAT GTCAAGCAGG TGCAACTGTA ATTCTAAATT TGTCAGCAAG TAATGAGACT
ACAGGGAAAG ATATTTATCG TAAAACCTTG GTGAGTAATC AATCTGCACG TTTGGTCTGC
GGTTATCTAT ATTCAAGTGC GGGAGAAGGA GAATCTACCA CAGACTTGGT ATTTTCAGGG
CATAATATGA TAGCGGAAAA TGGAACGGTA ATCGCTGAGT CAGAACGTTT TGTGAATGGC
GTAATTGTTT CTGAGGTCGA CCTTGAAAAA ATAATCTCTG AACGTAGAAG AATTTCAACT
TATCTTGTGG AAGAAAAGAA AGATTATACT TATTTAGAAT ATGGAGAATA TGCCACAGAA
AATAATTCTA ATTATGATAC CACGCTTAGT TTGACACGTT TTATTGATAA ATCCCCATTC
GTACCGACGA AGAAGGAAGA ACGGGAAAAA CGTTGTGATG AAATTATTCA TATGCAGGCA
TTAGGACTAA AAAAACGTTT ACAGCATACG GGAAGTAAAT CTGTTGTACT GGGTATCTCT
GGCGGTCTTG ATTCTACCTT GGCACTTTTG GTGACTAGAA GGGCTTTTGA TATGTTAGAG
CTTGATCCTA AGGGAATTGT AGCAGTAACA ATGCCTTGTT TTGGAACAAC AGATCGTACT
TACCAAAATG CTATCCTGTT AGTGCAGGAA TTATCCGCTA CGTTACGTGA GATTAGAATT
AATGAAGCGG TAGAACTTCA TTTTAGGGAT ATTGGTCATG ACATTAATAA GCATGATGTC
ACTTTTGAGA ATGGACAAGC AAGAGAGCGT ACCCAAGTTC TAATGGACAT CGCAAATCAA
GTGAATGGTT TTGTTGTTGG CACTGGAGAT ATGTCAGAGC TTGCTTTAGG ATGGGCAACT
TATAATGGAG ATCATATGTC GATGTACGGT GTCAATTCTT CCGTTCCTAA GACATTGGTT
CGTTATCTGG TTTCATATTT TGCAGAAGAA GCAAAGAGTG ACACCCTTAG AAATGTATTG
AAGGATGTTT TAGATACCCC TGTTAGCCCA GAGCTTCTTC CTCCAAAAGA CGGCGAAATA
GTACAAAAAA CAGAGGATGT AGTAGGTCCA TATGAGTTAC ATGATTTCTT CTTGTACTAT
GTATTAAGAT TTGGGTTTAC TCCATCAAAA ATATATCGTC TTGCCGTATA TGCATTTAAA
GATGACTATA CGAAGGAAAC AATTTATCGC TGGCTTACGA TATTTTATCG TAGATATTTT
CAACAACAAT ATAAACGCTC TTGTCTACCA GATGGACCTA AAGTTGGATC TGTAGCAGTT
TCTCCTCGTG GAGATCTTCG TATGCCAAGT GATGCTTCAG TTTCTTTATG GATGAAAGAC
TTAGAAAGTA TTCAAGATAA TTAA
|
|---|
| Protein sequence | MRHGFVKVAA ITPNIKVADC EYNVNEIIHQ IEEAKQKGAK VIVCPELCIT GYTCEDLFLQ
NTLLNGALDG LNKLIDYSKD IDALIAVGLP FLKDGKLFNV AVVLYQGELL GMVPKRNIPN
YSEFYEARYF GNGNDIVEHV TINHKKVPFG SNLIFCHREI PYLKVGIEIC EDLWVPQPPS
GGLCQAGATV ILNLSASNET TGKDIYRKTL VSNQSARLVC GYLYSSAGEG ESTTDLVFSG
HNMIAENGTV IAESERFVNG VIVSEVDLEK IISERRRIST YLVEEKKDYT YLEYGEYATE
NNSNYDTTLS LTRFIDKSPF VPTKKEEREK RCDEIIHMQA LGLKKRLQHT GSKSVVLGIS
GGLDSTLALL VTRRAFDMLE LDPKGIVAVT MPCFGTTDRT YQNAILLVQE LSATLREIRI
NEAVELHFRD IGHDINKHDV TFENGQARER TQVLMDIANQ VNGFVVGTGD MSELALGWAT
YNGDHMSMYG VNSSVPKTLV RYLVSYFAEE AKSDTLRNVL KDVLDTPVSP ELLPPKDGEI
VQKTEDVVGP YELHDFFLYY VLRFGFTPSK IYRLAVYAFK DDYTKETIYR WLTIFYRRYF
QQQYKRSCLP DGPKVGSVAV SPRGDLRMPS DASVSLWMKD LESIQDN
|
|---|
| |