Gene Cphy_3354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3354 
Symbol 
ID5741636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp4088838 
End bp4089773 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content40% 
IMG OID641294457 
Productsuccinylglutamate desuccinylase/aspartoacylase 
Protein accessionYP_001560446 
Protein GI160881478 
COG category[R] General function prediction only 
COG ID[COG3608] Predicted deacylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAAAAA CAGTGGTTTC GGTAGGTTTG CCAGTATTAG AAACGATGCA TATTAAAAAG 
AATCGCCTGG AGCCGGAGAA TAAAAATGGA AATGAAAGAA GGATTTGTAT TGTCACAGGA
ATCCATGGTG ATGAGCTGGA AGGCCAGTAT ATATGTTATC AATTGATACG TCGTATTCAG
GAATCGAAGG AGTTCTTAAC AGGGATTGTA GATGTTTATC CATGTGTAAA TCCACTTGGT
ATGGAATCGA TTACAAGAAG AATACCGACC TTTGATCTAG ATATGAACCG AAGCTTCCCG
GGAGATATGG ATGGCGATAT GTCCGAGTAC GTTGCTGCAA AGCTTGTAGA GGATTTTGAG
GGAGCAGATT TTTGTGTAGA TTTGCATGCA AGTAATATCT TCTTACGAGA GATTCCACAG
GTCCGACTTG ATAAGCAGCA TGAAGAAAGC CTATTGGAAT ATGCAAAGTT GTTGAATACT
GACTTTATCT GGGTTCATTC CTCTCCAACG GTTGAACCTG CAAGTCTATA CCATAGCTTA
AATCAAAAAA AGGTACCAAC GTTAAGTATT GAGATGGGCG TTGGTATGAG AATTACAAAA
GAGTTTGGAG ATCAGATCTT AGAAGGTATT TTTTGTCTGA TGCATAAGCT TGGTATTTGG
AGTGGACCTG TCATTACACC AAAGACGTCA GTGATCTCAT CCGATCAGGA TAAGGTGACT
TTAATACATG CAGAAGCCTC AGGTGTATTT TTACCATGTG TAGAACACCT AATGGATATC
AAAGCTGGAG ATGTTGTGGG AAATATTGTG GATAGCTTAA ATGGTACGAT TGTTCAACAC
ATTATAGCTC CTTGTGATGG AGTCGTGTTT ACATTAAGGG AATACCCTGT TGTTTATGAT
GGTTCCCTAA TTGCTAGAAT CCTAGGAGGG GTGTAA
 
Protein sequence
MVKTVVSVGL PVLETMHIKK NRLEPENKNG NERRICIVTG IHGDELEGQY ICYQLIRRIQ 
ESKEFLTGIV DVYPCVNPLG MESITRRIPT FDLDMNRSFP GDMDGDMSEY VAAKLVEDFE
GADFCVDLHA SNIFLREIPQ VRLDKQHEES LLEYAKLLNT DFIWVHSSPT VEPASLYHSL
NQKKVPTLSI EMGVGMRITK EFGDQILEGI FCLMHKLGIW SGPVITPKTS VISSDQDKVT
LIHAEASGVF LPCVEHLMDI KAGDVVGNIV DSLNGTIVQH IIAPCDGVVF TLREYPVVYD
GSLIARILGG V